BLASTX nr result
ID: Coptis23_contig00027449
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00027449
(1707 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [S... 263 8e-68
gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R... 256 2e-65
gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group] 238 5e-60
ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group] g... 238 5e-60
ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group] g... 233 1e-58
>ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [Sorghum bicolor]
gi|241931317|gb|EES04462.1| hypothetical protein
SORBIDRAFT_04g002725 [Sorghum bicolor]
Length = 604
Score = 263 bits (673), Expect = 8e-68
Identities = 145/466 (31%), Positives = 267/466 (57%), Gaps = 12/466 (2%)
Frame = +1
Query: 346 KSDSWNHFDVVDVKKDDGTLETKARCRYCHKLMSCVASNGTSHLRRHTESCLSK-NTHSI 522
+S W D + DG + + RC++C+++ + ++GTSH+RRH E+C + H +
Sbjct: 6 RSAIWKDMDPI---YQDGKV-IQGRCKHCYEVFAAARTSGTSHMRRHLENCEPRLKMHDL 61
Query: 523 RPEQVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEP 702
+ + + V+ N FD + +L++ ELPFS+ E F + S NP E
Sbjct: 62 VEKLQSVSTESAVLTNWRFDPKLTRCELVRLIVLHELPFSFVEYDGFRRYSASLNPLAET 121
Query: 703 ISRHTIKDIVLEKFEGEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWK 882
+SR TIK+ +LE ++ ++ L+ + ++ + + LT+ LWT++Q++GY+C+T H++D DWK
Sbjct: 122 VSRTTIKENILEAYKNHRTALKEMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDWK 181
Query: 883 LNKRTISFPMPEYPNTEFTIFEAIYSNILSWNLSEKVFTITLDDDISIDVTRRLKDLLFT 1062
+ KR I F + + P+ F ++ ++ I +N+ +K+F+ITLD+ S + D+L
Sbjct: 182 VQKRIIKFCVVKTPHDGFNLYTSMLRTIRFYNIEDKLFSITLDNATS---NNTMMDILKA 238
Query: 1063 N------NHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKF 1224
N H G+ LFHVRC+ +++N IV +GL+ I + NIR S++++R S+ +KF
Sbjct: 239 NLLKMDLLHCDGD-LFHVRCAAHVINLIVKDGLQAIDGVINNIRESVKYIRGSQSRKEKF 297
Query: 1225 SELCKRAGMIFKNLPP-DISCRWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWK 1398
++ + G+ ++ P D++ RWN+TY M+ +A+P++ F EL DS + + PS DW+
Sbjct: 298 EDIIEELGIRCRSAPQIDVANRWNSTYDMIQSAMPFKDAFLELKVKDSNYTYCPSSQDWQ 357
Query: 1399 NATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSK--YENDSSCRGVVGSMK 1572
A + LLK F +++K+ SG + +S+ + HQ+ ++ +L + + + + +V M+
Sbjct: 358 RANAVCKLLKVFKKATKVVSGSTYPTSNLYFHQIWSVRQVLEEEAFSPNETIAAMVLEMQ 417
Query: 1573 SKLSEYWREIPLVLGLAACMDPRYKLTFLEVCLEVICG-YDETHRL 1707
+K +YW L + +DPR+K F+E L+ G + H L
Sbjct: 418 AKFDKYWMISYLTNCVPVVLDPRFKFGFIEFRLKQAFGQHGSVHHL 463
>gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R570]
Length = 607
Score = 256 bits (653), Expect = 2e-65
Identities = 143/459 (31%), Positives = 261/459 (56%), Gaps = 12/459 (2%)
Frame = +1
Query: 346 KSDSWNHFDVVDVKKDDGTLETKARCRYCHKLMSCVASNGTSHLRRHTESCLSK-NTHSI 522
+S W D + DG + + RC++C+++ + ++GTSH+RRH E C + H
Sbjct: 9 RSAIWKDMDPI---YQDGKV-IQGRCKHCYEVFAAARTSGTSHMRRHLEICEPRLKMHDF 64
Query: 523 RPE-QVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLE 699
+ Q + T ++ N FD + +L++ ELPFS+ E F + S NP E
Sbjct: 65 VDKLQSSVTTKSAILTNWRFDPKLTRCELVRLIVLHELPFSFVEYDEFRSYSASLNPLAE 124
Query: 700 PISRHTIKDIVLEKFEGEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDW 879
+SR TIK+ LE ++ ++ LR + ++ + + LT+ LWT++Q++GY+C+T H++D DW
Sbjct: 125 TVSRTTIKENYLEAYKNHRTTLREMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDW 184
Query: 880 KLNKRTISFPMPEYPNTEFTIFEAIYSNILSWNLSEKVFTITLDDDISIDVTRRLKDLLF 1059
K+ KR I F + + P+ F ++ ++ I +N+ +K+F+ITLD+ + + D+L
Sbjct: 185 KVRKRIIRFCVVKTPHDGFNLYTSMLRTIKFYNIEDKLFSITLDNAAT---NNTMMDILK 241
Query: 1060 TN------NHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQK 1221
N H G+ LFH+RC+ +++N IV +GL+ I + NIR S+++VR+S+ +K
Sbjct: 242 ANLLKMDMLHCDGD-LFHIRCAAHVINLIVKDGLQAIDGVINNIRESVKYVRASQSRKEK 300
Query: 1222 FSELCKRAGMIFKNLPP-DISCRWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDW 1395
F ++ G+ +++P D+ RWN+T M+++A+P++ F EL DS + + PS DW
Sbjct: 301 FEDIVVELGIRCRSVPKIDVENRWNSTCDMIESAMPFKEAFLELKVKDSNYSYCPSSQDW 360
Query: 1396 KNATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSK--YENDSSCRGVVGSM 1569
+ A + LLK F ++ ++ SG S +S+ + H++ +I +L + + + + +V M
Sbjct: 361 ERANAVCKLLKVFKKAMEVVSGTSYPTSNLYFHEIWSIKQVLEEEAFSPNETIVTMVSEM 420
Query: 1570 KSKLSEYWREIPLVLGLAACMDPRYKLTFLEVCLEVICG 1686
++K +YW L + +DPR+K F+E L+ G
Sbjct: 421 QAKFDKYWMISYLTNCVPVILDPRFKFGFIEFRLKQAFG 459
>gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 669
Score = 238 bits (606), Expect = 5e-60
Identities = 136/464 (29%), Positives = 246/464 (53%), Gaps = 10/464 (2%)
Frame = +1
Query: 346 KSDSWNHFDVVDVKKDDGTLETKARCRYCHKLMSCVASNGTSHLRRHTESCLSKNTHSIR 525
+S++W F + + + G +C++C + GTS LR+H C K +++
Sbjct: 160 RSEAWKEFVPILIDNEVGA----GKCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALK 214
Query: 526 P----EQVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPH 693
+ +P + N FD + ++ ++++ ELPF + E F + S NP+
Sbjct: 215 IVGNLDSTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPY 274
Query: 694 LEPISRHTIKDIVLEKFEGEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQ 873
+ ISR TI++ + F+ +K ++ + + + + LT+ +WT++Q+MGY+C+T HF+D
Sbjct: 275 FKIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDT 334
Query: 874 DWKLNKRTISFPMPEYPNTEFTIFEAIYSNILSWNLSEKVFTITLDDDISIDVTRRLK-- 1047
DW++ KR I F + P+T +F A+ S I WN+++K+F++TLD + D +L
Sbjct: 335 DWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKC 394
Query: 1048 DLLFTNNHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFS 1227
+L G +L H RC+T+++N I +GL+ I + NIR S+++ +S +KF
Sbjct: 395 NLKAKKTIPAGGKLLHNRCATHVINLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFE 454
Query: 1228 ELCKRAGMIFKNLPP-DISCRWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKN 1401
E+ + G+ + P D+ RWN+TY ML+AA P+ R + L D + + PS W+
Sbjct: 455 EIIAQEGITCELHPTVDVCTRWNSTYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWER 514
Query: 1402 ATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKS 1575
+T++ +LK +++ + SG +S+ + H++ I L+L K ND+ +V MK
Sbjct: 515 STIVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKEHSNNDTEVASMVQKMKD 574
Query: 1576 KLSEYWREIPLVLGLAACMDPRYKLTFLEVCLEVICGYDETHRL 1707
K +YW + L + DPR+K F+E L G + R+
Sbjct: 575 KFDKYWLKSYKYLCIPVIFDPRFKFNFVEFRLGQAFGENAKERI 618
>ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group]
gi|108711807|gb|ABF99602.1| BED zinc finger family
protein, expressed [Oryza sativa Japonica Group]
gi|108711808|gb|ABF99603.1| BED zinc finger family
protein, expressed [Oryza sativa Japonica Group]
gi|215704882|dbj|BAG94910.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255675011|dbj|BAF13646.2| Os03g0822100 [Oryza sativa
Japonica Group]
Length = 612
Score = 238 bits (606), Expect = 5e-60
Identities = 136/464 (29%), Positives = 246/464 (53%), Gaps = 10/464 (2%)
Frame = +1
Query: 346 KSDSWNHFDVVDVKKDDGTLETKARCRYCHKLMSCVASNGTSHLRRHTESCLSKNTHSIR 525
+S++W F + + + G +C++C + GTS LR+H C K +++
Sbjct: 103 RSEAWKEFVPILIDNEVGA----GKCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALK 157
Query: 526 P----EQVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPH 693
+ +P + N FD + ++ ++++ ELPF + E F + S NP+
Sbjct: 158 IVGNLDSTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPY 217
Query: 694 LEPISRHTIKDIVLEKFEGEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQ 873
+ ISR TI++ + F+ +K ++ + + + + LT+ +WT++Q+MGY+C+T HF+D
Sbjct: 218 FKIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDT 277
Query: 874 DWKLNKRTISFPMPEYPNTEFTIFEAIYSNILSWNLSEKVFTITLDDDISIDVTRRLK-- 1047
DW++ KR I F + P+T +F A+ S I WN+++K+F++TLD + D +L
Sbjct: 278 DWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKC 337
Query: 1048 DLLFTNNHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFS 1227
+L G +L H RC+T+++N I +GL+ I + NIR S+++ +S +KF
Sbjct: 338 NLKAKKTIPAGGKLLHNRCATHVINLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFE 397
Query: 1228 ELCKRAGMIFKNLPP-DISCRWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKN 1401
E+ + G+ + P D+ RWN+TY ML+AA P+ R + L D + + PS W+
Sbjct: 398 EIIAQEGITCELHPTVDVCTRWNSTYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWER 457
Query: 1402 ATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKS 1575
+T++ +LK +++ + SG +S+ + H++ I L+L K ND+ +V MK
Sbjct: 458 STIVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKEHSNNDTEVASMVQKMKD 517
Query: 1576 KLSEYWREIPLVLGLAACMDPRYKLTFLEVCLEVICGYDETHRL 1707
K +YW + L + DPR+K F+E L G + R+
Sbjct: 518 KFDKYWLKSYKYLCIPVIFDPRFKFNFVEFRLGQAFGENAKERI 561
>ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group]
gi|255677983|dbj|BAF22239.2| Os07g0624100 [Oryza sativa
Japonica Group]
Length = 762
Score = 233 bits (594), Expect = 1e-58
Identities = 134/461 (29%), Positives = 242/461 (52%), Gaps = 9/461 (1%)
Frame = +1
Query: 352 DSWNHFDVVDVKKDDGTLETKARCRYCHKLMSCVASNGTSHLRRHTESCLSKNT--HSIR 525
++W F + + + G +C++C + GTS LR+H C + + +
Sbjct: 125 EAWKEFVPILIDNEVGA----GKCKHCDTEIRAKRGAGTSSLRKHLTRCKKRISALKIVG 180
Query: 526 PEQVTTTPPGEV-VVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEP 702
T P V + N FD + ++ ++++ ELPF + E F + S NP+ +
Sbjct: 181 NLDFTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFKI 240
Query: 703 ISRHTIKDIVLEKFEGEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWK 882
ISR TI++ + F+ +K ++ + + + + LT+ +WT++Q+MGY+C+T HF+D DW+
Sbjct: 241 ISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDWR 300
Query: 883 LNKRTISFPMPEYPNTEFTIFEAIYSNILSWNLSEKVFTITLDDDISIDVTRRLK--DLL 1056
+ KR I F + P+T +F A+ S I WN+++K+F++TLD+ + D +L +L
Sbjct: 301 VQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFSVTLDNASANDSMAKLLKCNLK 360
Query: 1057 FTNNHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFSELC 1236
G +L H RC +++N I +GL+ I + NIR S++++ +S +KF E+
Sbjct: 361 AKKTIPAGGKLLHNRCVAHVINLIAKDGLKVIDSIVCNIRESVKYMDNSPSRKEKFEEII 420
Query: 1237 KRAGMIFKNLPP-DISCRWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNATV 1410
+ G+ + P D+ WN+TY ML+AA P+ R + L + + + PS W+ AT+
Sbjct: 421 AQEGITCELHPTVDVCTHWNSTYLMLNAAFPFMRAYASLVVQEKNYKYAPSPDQWERATI 480
Query: 1411 MRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSK--YENDSSCRGVVGSMKSKLS 1584
+ +LK +++ + SG +S+ + H++ I L+L K ND+ +V MK K
Sbjct: 481 VSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKERSNNDTEVASMVKKMKDKFD 540
Query: 1585 EYWREIPLVLGLAACMDPRYKLTFLEVCLEVICGYDETHRL 1707
+YW + L + DPR+K F+E L G + R+
Sbjct: 541 KYWLKSYKYLCIPVIFDPRFKFKFVEFRLGQAFGENAKERI 581