BLASTX nr result

ID: Coptis23_contig00027447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027447
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16015.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_002279931.2| PREDICTED: uncharacterized protein LOC100265...   406   e-111
ref|XP_002520441.1| conserved hypothetical protein [Ricinus comm...   405   e-110
ref|XP_002313401.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_004160182.1| PREDICTED: uncharacterized LOC101208715 [Cuc...   401   e-109

>emb|CBI16015.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  412 bits (1060), Expect = e-113
 Identities = 209/305 (68%), Positives = 239/305 (78%), Gaps = 6/305 (1%)
 Frame = +2

Query: 2   EELRREVKGKEAEVENLKEKLRSM-----SGKKGKFVQSKRKVSCSQGVVAVAPVPELFE 166
           EEL+R VK +E EVENLKEKL+S      SGKKG+F QSK+KVSCSQG VA  P P+LFE
Sbjct: 84  EELKRAVKAREVEVENLKEKLKSATSLNSSGKKGRF-QSKKKVSCSQGQVAALPAPDLFE 142

Query: 167 AAMSQVKETSKSFTSVLLSLMRTARWDIGAAVRXXXXXXXXXXXXXXXXXPV-GSHHAKY 343
             M  VKE SKSFT++LLSLMR+A WDI AAVR                  V GSHHAKY
Sbjct: 143 GTMGVVKEASKSFTALLLSLMRSAHWDIAAAVRSIEAATAVTGATADTAISVVGSHHAKY 202

Query: 344 ALESYICRKIFQGFDHETFYIDGSLSSLLNPDQFHRDCFTQYRDMSSMDPTELLGILPTC 523
           ALESY+CRKIFQGFDHETFY+DGSLSSLL+PDQ+ RDCF QYRDM +MDP ELLGILPTC
Sbjct: 203 ALESYVCRKIFQGFDHETFYMDGSLSSLLHPDQYRRDCFAQYRDMKAMDPVELLGILPTC 262

Query: 524 HFGQFCSRKYLSIIHPKMEESLFGNLEQHILVSAGNHPRSKFYGLFLRLAKAVWLLHLLA 703
           HFG+FC++KYL+I+HPKMEESLFG+LE    V AGNHPRS FY  FL LAKAVWLLHLLA
Sbjct: 263 HFGKFCTKKYLAIVHPKMEESLFGDLEHRRQVLAGNHPRSHFYSEFLGLAKAVWLLHLLA 322

Query: 704 FALDPSPFLFSSMKGAEFQPEYMESVVRFSGRGMPLGLIVGIPVTPGFKLGTGSIIKARV 883
           F+LDP P  F + +GA+F P+YMESV+R SG  +P   IVGIPV+PGFKLG GS+IKARV
Sbjct: 323 FSLDPPPGHFEASRGADFHPQYMESVIRLSGGRVPADQIVGIPVSPGFKLGNGSVIKARV 382

Query: 884 FLVSR 898
           +LVSR
Sbjct: 383 YLVSR 387


>ref|XP_002279931.2| PREDICTED: uncharacterized protein LOC100265690 [Vitis vinifera]
          Length = 542

 Score =  406 bits (1043), Expect = e-111
 Identities = 208/305 (68%), Positives = 238/305 (78%), Gaps = 6/305 (1%)
 Frame = +2

Query: 2    EELRREVKGKEAEVENLKEKLRSM-----SGKKGKFVQSKRKVSCSQGVVAVAPVPELFE 166
            EEL+R VK +E EVENLKEKL+S      SGKKG+F QSK+KVSCSQ  VA  P P+LFE
Sbjct: 240  EELKRAVKAREVEVENLKEKLKSATSLNSSGKKGRF-QSKKKVSCSQ--VAALPAPDLFE 296

Query: 167  AAMSQVKETSKSFTSVLLSLMRTARWDIGAAVRXXXXXXXXXXXXXXXXXPV-GSHHAKY 343
              M  VKE SKSFT++LLSLMR+A WDI AAVR                  V GSHHAKY
Sbjct: 297  GTMGVVKEASKSFTALLLSLMRSAHWDIAAAVRSIEAATAVTGATADTAISVVGSHHAKY 356

Query: 344  ALESYICRKIFQGFDHETFYIDGSLSSLLNPDQFHRDCFTQYRDMSSMDPTELLGILPTC 523
            ALESY+CRKIFQGFDHETFY+DGSLSSLL+PDQ+ RDCF QYRDM +MDP ELLGILPTC
Sbjct: 357  ALESYVCRKIFQGFDHETFYMDGSLSSLLHPDQYRRDCFAQYRDMKAMDPVELLGILPTC 416

Query: 524  HFGQFCSRKYLSIIHPKMEESLFGNLEQHILVSAGNHPRSKFYGLFLRLAKAVWLLHLLA 703
            HFG+FC++KYL+I+HPKMEESLFG+LE    V AGNHPRS FY  FL LAKAVWLLHLLA
Sbjct: 417  HFGKFCTKKYLAIVHPKMEESLFGDLEHRRQVLAGNHPRSHFYSEFLGLAKAVWLLHLLA 476

Query: 704  FALDPSPFLFSSMKGAEFQPEYMESVVRFSGRGMPLGLIVGIPVTPGFKLGTGSIIKARV 883
            F+LDP P  F + +GA+F P+YMESV+R SG  +P   IVGIPV+PGFKLG GS+IKARV
Sbjct: 477  FSLDPPPGHFEASRGADFHPQYMESVIRLSGGRVPADQIVGIPVSPGFKLGNGSVIKARV 536

Query: 884  FLVSR 898
            +LVSR
Sbjct: 537  YLVSR 541


>ref|XP_002520441.1| conserved hypothetical protein [Ricinus communis]
            gi|223540283|gb|EEF41854.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 412

 Score =  405 bits (1040), Expect = e-110
 Identities = 208/310 (67%), Positives = 241/310 (77%), Gaps = 11/310 (3%)
 Frame = +2

Query: 2    EELRREVKGKEAEVENLKEKLRSMS-------GKKGKFVQSKRKVSCSQGV--VAVAPVP 154
            EEL++EVK +E EVENLKEK++ +S       GKKGK   SKRKV+CS     VA+AP P
Sbjct: 103  EELKKEVKSREVEVENLKEKIKCLSSSFNNGSGKKGKSF-SKRKVNCSLAATQVALAPAP 161

Query: 155  ELFEAAMSQVKETSKSFTSVLLSLMRTARWDIGAAVRXXXXXXXXXXXXXXXXXP--VGS 328
            +LFEA MSQVKETSKSFTS+LLSLMR+A WDI AAVR                    + +
Sbjct: 162  DLFEATMSQVKETSKSFTSLLLSLMRSAHWDIAAAVRSIEAAAATNNNINTTAIASTIIT 221

Query: 329  HHAKYALESYICRKIFQGFDHETFYIDGSLSSLLNPDQFHRDCFTQYRDMSSMDPTELLG 508
            HHAKYALESYI RKIFQGFDHETFY+DGSLSSLLNPDQF RDCFTQYRDM +MDP ELLG
Sbjct: 222  HHAKYALESYISRKIFQGFDHETFYMDGSLSSLLNPDQFRRDCFTQYRDMKAMDPVELLG 281

Query: 509  ILPTCHFGQFCSRKYLSIIHPKMEESLFGNLEQHILVSAGNHPRSKFYGLFLRLAKAVWL 688
            ILPTCHFG+FC +KY++I+HPKMEESLFGNLEQ   V  G+HPRS+FY  FL LAKA+WL
Sbjct: 282  ILPTCHFGKFCFKKYVAIVHPKMEESLFGNLEQRQQVLDGSHPRSQFYAEFLGLAKAIWL 341

Query: 689  LHLLAFALDPSPFLFSSMKGAEFQPEYMESVVRFSGRGMPLGLIVGIPVTPGFKLGTGSI 868
            LHLLAF+LDP P  F + +GAEF P+YMESVV+FSG  +P G +VG PV+PGFKLG GS+
Sbjct: 342  LHLLAFSLDPPPSQFEASRGAEFHPQYMESVVKFSGGRIPAGQVVGFPVSPGFKLGNGSV 401

Query: 869  IKARVFLVSR 898
            IKARV+LV R
Sbjct: 402  IKARVYLVPR 411


>ref|XP_002313401.1| predicted protein [Populus trichocarpa] gi|222849809|gb|EEE87356.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  402 bits (1032), Expect = e-110
 Identities = 207/311 (66%), Positives = 237/311 (76%), Gaps = 12/311 (3%)
 Frame = +2

Query: 2   EELRREVKGKEAEVENLKEKLRSM-------SGKKGKFVQSKRKVSCSQGV-VAVAPVPE 157
           E+L++EVK +E EVENLKEKLRS+       SGKKG+  QS+RKVSCS GV VA AP PE
Sbjct: 18  EDLKKEVKAREVEVENLKEKLRSVTSLSSDGSGKKGRS-QSRRKVSCSLGVQVAAAPAPE 76

Query: 158 LFEAAMSQVKETSKSFTSVLLSLMRTARWDIGAAVRXXXXXXXXXXXXXXXXXPV----G 325
           LFE  MSQVK TSKSFTS+LL+ MR A WDI AAVR                  +     
Sbjct: 77  LFELTMSQVKRTSKSFTSLLLTFMRAAHWDIAAAVRSIEAATTTTDNLTTSTTAITSTIA 136

Query: 326 SHHAKYALESYICRKIFQGFDHETFYIDGSLSSLLNPDQFHRDCFTQYRDMSSMDPTELL 505
           SHHAKYALESYI RK+FQGFDHETFY+DGSLSSLLNPDQF RDCF QYRDM +MDP ELL
Sbjct: 137 SHHAKYALESYISRKVFQGFDHETFYMDGSLSSLLNPDQFRRDCFAQYRDMKAMDPIELL 196

Query: 506 GILPTCHFGQFCSRKYLSIIHPKMEESLFGNLEQHILVSAGNHPRSKFYGLFLRLAKAVW 685
           GILPTCHFG+FCS++YL I+HPKMEESLFGNLEQ   V  G+HPRS+FYG FL LAKA+W
Sbjct: 197 GILPTCHFGKFCSKRYLEIVHPKMEESLFGNLEQRQQVLTGSHPRSEFYGEFLGLAKAIW 256

Query: 686 LLHLLAFALDPSPFLFSSMKGAEFQPEYMESVVRFSGRGMPLGLIVGIPVTPGFKLGTGS 865
           LLHLLAF+LDP+P  F + +GAEF P+YMESVV+FS   +P G IVG PV+PGFKLG  S
Sbjct: 257 LLHLLAFSLDPAPSQFEASRGAEFHPQYMESVVKFSSGRIPAGHIVGFPVSPGFKLGNRS 316

Query: 866 IIKARVFLVSR 898
           +IKA V+L  R
Sbjct: 317 VIKASVYLFPR 327


>ref|XP_004160182.1| PREDICTED: uncharacterized LOC101208715 [Cucumis sativus]
          Length = 489

 Score =  401 bits (1031), Expect = e-109
 Identities = 208/308 (67%), Positives = 237/308 (76%), Gaps = 9/308 (2%)
 Frame = +2

Query: 2    EELRREVKGKEAEVENLKEKLR---------SMSGKKGKFVQSKRKVSCSQGVVAVAPVP 154
            EEL++EVK ++ EVENLKEKL+         S  GKKG+  QSKRKVSCS G VA +PVP
Sbjct: 183  EELKKEVKARDVEVENLKEKLKNSMTLAKGSSYGGKKGRS-QSKRKVSCSFGQVAASPVP 241

Query: 155  ELFEAAMSQVKETSKSFTSVLLSLMRTARWDIGAAVRXXXXXXXXXXXXXXXXXPVGSHH 334
            ELFEA MSQVKE SK+FTS+LLSLMR+A WDI AAVR                     HH
Sbjct: 242  ELFEATMSQVKEASKAFTSLLLSLMRSAHWDIAAAVRSIESAIAESDNTYLDTVAT-PHH 300

Query: 335  AKYALESYICRKIFQGFDHETFYIDGSLSSLLNPDQFHRDCFTQYRDMSSMDPTELLGIL 514
            AK+ALESYI RKIF GFDHETFY+DGSLSSLLNP+QF RDCFTQYRDM +MDP ELLGIL
Sbjct: 301  AKFALESYISRKIFHGFDHETFYMDGSLSSLLNPEQFRRDCFTQYRDMKAMDPAELLGIL 360

Query: 515  PTCHFGQFCSRKYLSIIHPKMEESLFGNLEQHILVSAGNHPRSKFYGLFLRLAKAVWLLH 694
            PTCHFG+FCS+KYLSI+HPKMEESLFG+ EQ   + AGNHPRS+FY  FL LAKAVWLLH
Sbjct: 361  PTCHFGKFCSKKYLSIVHPKMEESLFGDSEQRRQILAGNHPRSQFYAEFLGLAKAVWLLH 420

Query: 695  LLAFALDPSPFLFSSMKGAEFQPEYMESVVRFSGRGMPLGLIVGIPVTPGFKLGTGSIIK 874
            LLAF+LDP+P  F + +GAEF  +YMESVV+FS       LIVG PV+PGFKLG GS+IK
Sbjct: 421  LLAFSLDPAPSQFEASRGAEFHVQYMESVVKFSCGRASTSLIVGFPVSPGFKLGNGSVIK 480

Query: 875  ARVFLVSR 898
            ARVFLVS+
Sbjct: 481  ARVFLVSK 488


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