BLASTX nr result

ID: Coptis23_contig00027446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027446
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002465505.1| hypothetical protein SORBIDRAFT_01g040155 [S...   123   1e-26
tpg|DAA44535.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea m...   122   3e-26
tpg|DAA44534.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea m...   122   3e-26
ref|XP_002518124.1| chromosome transmission fidelity factor, put...   121   7e-26

>ref|XP_002299277.1| predicted protein [Populus trichocarpa] gi|222846535|gb|EEE84082.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/81 (75%), Positives = 68/81 (83%)
 Frame = -1

Query: 244 KALQDSSESPNEVTHHETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVF 65
           KALQ SSE  N+    ET  + EKLWV+KYAPNSFTELLSDEQTNREVLLW KQWDS VF
Sbjct: 193 KALQASSEDQNDDILPETQVMHEKLWVDKYAPNSFTELLSDEQTNREVLLWFKQWDSCVF 252

Query: 64  GSDIRSTKDDVLSSLRRHSTV 2
           GSDIRST DD+LS+LRRHS++
Sbjct: 253 GSDIRSTSDDILSALRRHSSI 273


>ref|XP_002465505.1| hypothetical protein SORBIDRAFT_01g040155 [Sorghum bicolor]
           gi|241919359|gb|EER92503.1| hypothetical protein
           SORBIDRAFT_01g040155 [Sorghum bicolor]
          Length = 904

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/80 (76%), Positives = 69/80 (86%)
 Frame = -1

Query: 244 KALQDSSESPNEVTHHETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVF 65
           KALQ+S++S + V    TP V+EKLWVEKYAPNSFTELLSDE TNREVLLWLKQWDS VF
Sbjct: 191 KALQESTDSIDHVACSVTPLVTEKLWVEKYAPNSFTELLSDEHTNREVLLWLKQWDSSVF 250

Query: 64  GSDIRSTKDDVLSSLRRHST 5
           GS IR+T DDVLS+LRRHS+
Sbjct: 251 GSHIRATGDDVLSALRRHSS 270


>tpg|DAA44535.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea mays]
          Length = 944

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/80 (76%), Positives = 69/80 (86%)
 Frame = -1

Query: 244 KALQDSSESPNEVTHHETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVF 65
           KALQ+S++S + V    TP V+EKLWVEKYAPNSFTELLSDE TNREVLLWLKQWDS VF
Sbjct: 190 KALQESTDSIDRVACSATPLVTEKLWVEKYAPNSFTELLSDEHTNREVLLWLKQWDSIVF 249

Query: 64  GSDIRSTKDDVLSSLRRHST 5
           GS IR+T DDVLS+LRRHS+
Sbjct: 250 GSHIRATGDDVLSALRRHSS 269


>tpg|DAA44534.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea mays]
          Length = 466

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/80 (76%), Positives = 69/80 (86%)
 Frame = -1

Query: 244 KALQDSSESPNEVTHHETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVF 65
           KALQ+S++S + V    TP V+EKLWVEKYAPNSFTELLSDE TNREVLLWLKQWDS VF
Sbjct: 190 KALQESTDSIDRVACSATPLVTEKLWVEKYAPNSFTELLSDEHTNREVLLWLKQWDSIVF 249

Query: 64  GSDIRSTKDDVLSSLRRHST 5
           GS IR+T DDVLS+LRRHS+
Sbjct: 250 GSHIRATGDDVLSALRRHSS 269


>ref|XP_002518124.1| chromosome transmission fidelity factor, putative [Ricinus
           communis] gi|223542720|gb|EEF44257.1| chromosome
           transmission fidelity factor, putative [Ricinus
           communis]
          Length = 813

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/81 (75%), Positives = 67/81 (82%)
 Frame = -1

Query: 244 KALQDSSESPNEVTHHETPGVSEKLWVEKYAPNSFTELLSDEQTNREVLLWLKQWDSGVF 65
           KAL  SSE   +V    T  + E+LWV+KYAPNSFTELLSDEQTNREVLLWLKQWDS VF
Sbjct: 190 KALHASSEGQADVVLTGTEMMHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 249

Query: 64  GSDIRSTKDDVLSSLRRHSTV 2
           GS+IRST DD+LSSLRRHSTV
Sbjct: 250 GSEIRSTSDDILSSLRRHSTV 270


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