BLASTX nr result

ID: Coptis23_contig00027445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027445
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299603.1| NBS resistance protein [Populus trichocarpa]...   137   2e-30
ref|XP_003632806.1| PREDICTED: uncharacterized protein LOC100261...   132   6e-29
ref|XP_002304149.1| NBS resistance protein [Populus trichocarpa]...   129   5e-28
emb|CAN82596.1| hypothetical protein VITISV_020212 [Vitis vinifera]   125   8e-27
gb|AFW66114.1| hypothetical protein ZEAMMB73_778765 [Zea mays]         91   3e-16

>ref|XP_002299603.1| NBS resistance protein [Populus trichocarpa]
           gi|222846861|gb|EEE84408.1| NBS resistance protein
           [Populus trichocarpa]
          Length = 1043

 Score =  137 bits (345), Expect = 2e-30
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +1

Query: 418 MDALQVISSATQIISSMVGAVGALEQASRNLDEAPKRIRSLEEFVFEPENLTPRIKQKHM 597
           M+ALQVISSATQIISSMVGAV AL+QASRNLDEAPKRIRSLEEFV++ ENLT  I+QKH+
Sbjct: 1   MEALQVISSATQIISSMVGAVSALDQASRNLDEAPKRIRSLEEFVYDLENLTRGIRQKHV 60

Query: 598 YTIHNPQLDHKIQSLNGLIERLQP 669
           Y +HNPQLDH+IQSLN LIERL+P
Sbjct: 61  YKLHNPQLDHQIQSLNALIERLRP 84


>ref|XP_003632806.1| PREDICTED: uncharacterized protein LOC100261821 [Vitis vinifera]
           gi|297743414|emb|CBI36281.3| unnamed protein product
           [Vitis vinifera]
          Length = 1046

 Score =  132 bits (332), Expect = 6e-29
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = +1

Query: 418 MDALQVISSATQIISSMVGAVGALEQASRNLDEAPKRIRSLEEFVFEPENLTPRIKQKHM 597
           MDALQVI+SATQI+S MVGA+ ALEQASRNLDEAPKR+RSLE+FV + ENLT RIKQKH 
Sbjct: 1   MDALQVIASATQIVSGMVGAISALEQASRNLDEAPKRVRSLEDFVCDLENLTQRIKQKHA 60

Query: 598 YTIHNPQLDHKIQSLNGLIERLQP 669
           Y +HNPQL+++IQSLN LIERL P
Sbjct: 61  YKLHNPQLEYQIQSLNSLIERLHP 84


>ref|XP_002304149.1| NBS resistance protein [Populus trichocarpa]
           gi|222841581|gb|EEE79128.1| NBS resistance protein
           [Populus trichocarpa]
          Length = 1047

 Score =  129 bits (324), Expect = 5e-28
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = +1

Query: 418 MDALQVISSATQIISSMVGAVGALEQASRNLDEAPKRIRSLEEFVFEPENLTPRIKQKHM 597
           M+ALQVISSAT+IISSMVG V AL+QASRNLDEAPK+IR LEEFV++  NLT +IKQKH+
Sbjct: 1   MEALQVISSATEIISSMVGVVSALDQASRNLDEAPKKIRMLEEFVYDLANLTRQIKQKHV 60

Query: 598 YTIHNPQLDHKIQSLNGLIERLQP 669
           Y +HNPQLDH+IQSLN LIER+ P
Sbjct: 61  YKLHNPQLDHQIQSLNVLIERMHP 84


>emb|CAN82596.1| hypothetical protein VITISV_020212 [Vitis vinifera]
          Length = 1076

 Score =  125 bits (314), Expect = 8e-27
 Identities = 61/79 (77%), Positives = 71/79 (89%)
 Frame = +1

Query: 433 VISSATQIISSMVGAVGALEQASRNLDEAPKRIRSLEEFVFEPENLTPRIKQKHMYTIHN 612
           VI+SATQI+S MVGA+GALEQASRNLDEAPKR+RSLE+FV + ENLT RIKQKH Y +HN
Sbjct: 36  VIASATQIVSGMVGAIGALEQASRNLDEAPKRVRSLEDFVCDLENLTQRIKQKHAYKLHN 95

Query: 613 PQLDHKIQSLNGLIERLQP 669
           PQL+++IQSLN LIERL P
Sbjct: 96  PQLEYQIQSLNSLIERLHP 114


>gb|AFW66114.1| hypothetical protein ZEAMMB73_778765 [Zea mays]
          Length = 1041

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 42/83 (50%), Positives = 66/83 (79%)
 Frame = +1

Query: 418 MDALQVISSATQIISSMVGAVGALEQASRNLDEAPKRIRSLEEFVFEPENLTPRIKQKHM 597
           MD +QV++SATQ++S+MV AVGALEQA+ +L EAP+R++ LE+FV + + LT + +Q+H 
Sbjct: 1   MDVVQVLASATQLVSAMVSAVGALEQAASDLAEAPRRLQVLEDFVSDLDALTQQSRQRHA 60

Query: 598 YTIHNPQLDHKIQSLNGLIERLQ 666
           + +H PQLD + QSL  L+++L+
Sbjct: 61  HKLHGPQLDRQFQSLGRLMDQLR 83


Top