BLASTX nr result

ID: Coptis23_contig00027443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027443
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20108.3| unnamed protein product [Vitis vinifera]              451   e-124
emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]   448   e-123
ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...   442   e-121
gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsi...   415   e-113
dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thalian...   367   4e-99

>emb|CBI20108.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  451 bits (1160), Expect = e-124
 Identities = 237/454 (52%), Positives = 312/454 (68%), Gaps = 20/454 (4%)
 Frame = -3

Query: 1302 MEVSNEATXXXXXXXXXXXVWNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLT 1123
            ME+SNE+             WN FERV+K D+  A+C HCNK+LS S+ SGT+HL+NHL 
Sbjct: 1    MEISNESAIKKPKRLTSVV-WNHFERVRKADICYAVCIHCNKRLSGSSNSGTTHLRNHLM 59

Query: 1122 RCRKRANRELTQKLLLVRGKQR----------DGNIKFEQDYGPLDFKFDQEQSQLR--- 982
            RC KR+N +++Q L   R K+           D   + E++  P   KFDQEQ +     
Sbjct: 60   RCLKRSNYDVSQLLAAKRRKKEGALSLTAINYDEGQRKEENIKPTILKFDQEQKKDEPIN 119

Query: 981  ---LKFDQDRSRCDLARMIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQI 811
               ++FDQ+RSR DLARMII+H YPL+MV H GF+ FV +LQPLF+  S  A++ DC++I
Sbjct: 120  LGSIRFDQERSRLDLARMIILHGYPLAMVNHVGFKVFVKDLQPLFEVNS--AIELDCMEI 177

Query: 810  YGKEKQKVYEMLDKVPGRISLTADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVMVDP 631
            YGKEKQKVYE++ +  GRI+L  D+ TS +   Y+CLTAHY DE   LQKK+LNFV +DP
Sbjct: 178  YGKEKQKVYEVMSRSHGRINLAVDMWTSPEQAEYLCLTAHYIDEDWKLQKKILNFVSLDP 237

Query: 630  -HSEQSLAEVINTCLMEWDIDRKLFSMTFDKLFSNE-VVFRIRERLSQSRLLLNSGQLFH 457
             H+E  L+EVI  CLMEW++  KLFSMTF    +N+ V  R++E  SQ R LL SGQL  
Sbjct: 238  SHTEDMLSEVIIKCLMEWEVGHKLFSMTFHDCATNDDVALRVKEHFSQDRPLLGSGQLLD 297

Query: 456  VRCATNILNMIVQNVLEALHEVTHKIRESVRYVKSSDTIQQSFSEMAQQLIGDTQRSLCL 277
            VRC  ++LN+IVQ+ +EAL EVTHKIRESVRYVK+S      F+E+AQQ+  ++Q++L L
Sbjct: 298  VRCVGHVLNLIVQDCIEALREVTHKIRESVRYVKTSQATLGKFNEIAQQVGINSQQNLFL 357

Query: 276  DCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTLAPSDVEWERASTVCRYLKLFIEVAN 97
            DCP+QWN+TY M++  +EYK AFS LQE D  YT+A SD EWE AS++  Y+KL +E+  
Sbjct: 358  DCPTQWNSTYLMLDRVLEYKGAFSLLQEHDPGYTVALSDTEWEWASSITSYMKLLLEIIA 417

Query: 96   VFTG--AATANLYFPELCDIHLQLIERCKSSDPF 1
            V +     TAN+YFPE+CDIH+QLIE CKS D F
Sbjct: 418  VLSSNKCPTANIYFPEICDIHIQLIEWCKSPDDF 451


>emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]
          Length = 667

 Score =  448 bits (1153), Expect = e-123
 Identities = 235/454 (51%), Positives = 311/454 (68%), Gaps = 20/454 (4%)
 Frame = -3

Query: 1302 MEVSNEATXXXXXXXXXXXVWNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLT 1123
            ME+SNE+             WN FERV+K D+  A+C HCNK+LS S+ SGT+HL+NHL 
Sbjct: 1    MEISNESAIKKPKRLTSVV-WNHFERVRKADICYAVCIHCNKRLSGSSNSGTTHLRNHLM 59

Query: 1122 RCRKRANRELTQKLLLVRGKQR----------DGNIKFEQDYGPLDFKFDQEQSQLR--- 982
            RC KR+N +++Q L   R K+           D   + E++  P   KFDQEQ +     
Sbjct: 60   RCLKRSNYDVSQLLAAKRRKKEGALSLTAINYDEGQRKEENIKPTILKFDQEQKKDEPIN 119

Query: 981  ---LKFDQDRSRCDLARMIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQI 811
               ++FDQ+RSR DLARMII+H YPL+MV H GF+ FV +LQPLF+  S  A++ DC++I
Sbjct: 120  LGSIRFDQERSRLDLARMIILHGYPLAMVNHVGFKVFVKDLQPLFEVNS--AIELDCMEI 177

Query: 810  YGKEKQKVYEMLDKVPGRISLTADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVMVDP 631
            YGKEKQKVYE++ +  GRI+L  D+ TS +   Y+CLTAHY DE   LQKK+LNF+ +DP
Sbjct: 178  YGKEKQKVYEVMSRSHGRINLAVDMWTSPEQAEYLCLTAHYIDEDWKLQKKILNFLSLDP 237

Query: 630  -HSEQSLAEVINTCLMEWDIDRKLFSMTFDKLFSNE-VVFRIRERLSQSRLLLNSGQLFH 457
             H+E  L+E I  CLMEW++  KLFSMTF    +N+ V  R++E  SQ R LL SGQL  
Sbjct: 238  SHTEDMLSEFIIKCLMEWEVGHKLFSMTFHDCATNDDVALRVKEHFSQDRPLLGSGQLLD 297

Query: 456  VRCATNILNMIVQNVLEALHEVTHKIRESVRYVKSSDTIQQSFSEMAQQLIGDTQRSLCL 277
            VRC  ++LN+IVQ+ +EAL EVTHKIRESVRYVK+S      F+E+AQQ+  ++Q++L L
Sbjct: 298  VRCVGHVLNLIVQDCIEALREVTHKIRESVRYVKTSQATLGKFNEIAQQVGINSQQNLFL 357

Query: 276  DCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTLAPSDVEWERASTVCRYLKLFIEVAN 97
            DCP+QWN+TY M++  +EYK AFS LQE D  YT+A SD EWE AS++  Y+KL +E+  
Sbjct: 358  DCPTQWNSTYLMLDTVLEYKGAFSLLQEHDPGYTVALSDTEWEWASSITSYMKLLLEIIA 417

Query: 96   VFTG--AATANLYFPELCDIHLQLIERCKSSDPF 1
            V +     TAN+YFPE+CDIH+QLIE CKS D F
Sbjct: 418  VLSSNKCPTANIYFPEICDIHIQLIEWCKSPDDF 451


>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
            predicted protein [Populus trichocarpa]
          Length = 662

 Score =  442 bits (1137), Expect = e-121
 Identities = 226/457 (49%), Positives = 320/457 (70%), Gaps = 23/457 (5%)
 Frame = -3

Query: 1302 MEVSNEATXXXXXXXXXXXVWNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLT 1123
            MEVSNE+             WN F+R++K DV  A+C HC+KKLS S+ SGT+HL+NHL 
Sbjct: 1    MEVSNESAIKKPKRLTSVV-WNHFQRIRKADVCYAVCVHCDKKLSGSSNSGTTHLRNHLM 59

Query: 1122 RCRKRANRELTQKLLLVRGKQRDGNIKF-------------EQDYGPLDFKFDQEQSQLR 982
            RC KR+N +++Q LL  + K++D ++               ++   P   KFD EQ +  
Sbjct: 60   RCLKRSNYDVSQ-LLAAKKKKKDTSLSIANVNANYDETQRKDEYIKPTIIKFDHEQRKDE 118

Query: 981  L------KFDQDRSRCDLARMIIVHEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDC 820
            +      +FDQ++SR DLARMII+H YPL+MVEH GF+ FV NLQPLF+ +   +++  C
Sbjct: 119  IISLGSCRFDQEQSRLDLARMIILHGYPLTMVEHVGFKIFVKNLQPLFEFVPNSSIEVSC 178

Query: 819  VQIYGKEKQKVYEMLDKVPGRISLTADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVM 640
            ++IY KEKQKVYEM++++ GRI+L  ++ +S ++  Y+CL AHY DE   LQ+K+LNFV 
Sbjct: 179  IEIYMKEKQKVYEMINRLHGRINLAVEMWSSPENAEYLCLIAHYIDEDWKLQQKILNFVT 238

Query: 639  VDP-HSEQSLAEVINTCLMEWDIDRKLFSMTFDKLFSNE-VVFRIRERLSQSRLLLNSGQ 466
            +D  H+E  L+EVI  CLMEWD++ KLF+MTFD  F+++ +V RI++R+SQ+R LL++GQ
Sbjct: 239  LDSSHTEDMLSEVIINCLMEWDVECKLFAMTFDDCFADDDIVLRIKDRISQNRPLLSNGQ 298

Query: 465  LFHVRCATNILNMIVQNVLEALHEVTHKIRESVRYVKSSDTIQQSFSEMAQQLIGDTQRS 286
            LF VR A ++LN+IVQ+ +E + EVT K+R SVRYVKSS  IQ  F+E+A+Q+   +Q++
Sbjct: 299  LFDVRSAAHVLNLIVQDAMETIREVTEKVRGSVRYVKSSQVIQGKFNEIAEQIGISSQKN 358

Query: 285  LCLDCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTLAPSDVEWERASTVCRYLKLFIE 106
            L LD P++WN+TY M+E  I YK AF  LQE D  YT A +D EWE AS++  YLKLF+E
Sbjct: 359  LVLDLPTRWNSTYFMLETVIGYKSAFCFLQERDPAYTSALTDTEWEWASSITGYLKLFVE 418

Query: 105  VANVFTG--AATANLYFPELCDIHLQLIERCKSSDPF 1
            + N+F+G    TAN+YFPE+CD+H+QLIE CK+ D F
Sbjct: 419  ITNIFSGDKCPTANIYFPEICDVHIQLIEWCKNPDDF 455


>gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsis thaliana]
          Length = 676

 Score =  415 bits (1066), Expect = e-113
 Identities = 215/430 (50%), Positives = 297/430 (69%), Gaps = 16/430 (3%)
 Frame = -3

Query: 1242 WNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLTRCRKRANRELTQKL-LLVRG 1066
            WNDF+RV+KG+  +AIC+HC K+LS S+ SGTSHL+NHL RCR+R N          V+G
Sbjct: 32   WNDFDRVRKGETYIAICRHCKKRLSGSSASGTSHLRNHLIRCRRRTNGNNNGVAQYFVKG 91

Query: 1065 KQRD---GNIKFEQDYGPLDFKFDQEQSQ------LRLKFDQDRSRCDLARMIIVHEYPL 913
            K+++     IK E+    ++ +++ E+ +      + +  DQ R R DLARMII+H YPL
Sbjct: 92   KKKELANERIKDEEVLSVVNVRYEHEKEEHEDVNVVSMGLDQRRCRFDLARMIILHGYPL 151

Query: 912  SMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPGRISLTADLC 733
            SMVE  GFR F+ NLQPLF+ ++ E V+SDC++IY KEK K++E LDK+PG+IS++ D+ 
Sbjct: 152  SMVEDVGFRMFIGNLQPLFELVAFERVESDCMEIYAKEKHKIFEALDKLPGKISISVDVW 211

Query: 732  TSYQDNG-YMCLTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCLMEWDIDRKLF 559
            +   D+  ++CL AHY DE   L+K+VLNF MVDP HS + LAEVI TCLMEWDIDRKLF
Sbjct: 212  SGSGDSDEFLCLAAHYIDEGWELKKRVLNFFMVDPSHSGEMLAEVIMTCLMEWDIDRKLF 271

Query: 558  SMTFDKL--FSNEVVFRIRERLSQSRLLLNSGQLFHVRCATNILNMIVQNVLEALHEVTH 385
            SM       FS  V  +IR+RLSQ++ L   GQLF V C  N++N +VQ+ LEA  +  +
Sbjct: 272  SMASSHAPPFSENVASKIRDRLSQNKFLYCYGQLFDVSCGVNVINEMVQDSLEACCDTIN 331

Query: 384  KIRESVRYVKSSDTIQQSFSEMAQQLIGDTQRSLCLDCPSQWNTTYAMIEAAIEYKIAFS 205
             IRES+RYVKSS++IQ  F++   +    ++R+LC+D P +W++T  M+E A+E K AFS
Sbjct: 332  IIRESIRYVKSSESIQDRFNQWIVETGAVSERNLCIDDPMRWDSTCTMLENALEQKSAFS 391

Query: 204  HLQECDSDYTLAPSDVEWERASTVCRYLKLFIEVANVFTGAA--TANLYFPELCDIHLQL 31
             + E D D  L PSD+EWER  T+  +LK+F+EV N FT ++   AN+YFPE+CDIHL+L
Sbjct: 392  LMNEHDPDSVLCPSDLEWERLGTIVEFLKVFVEVINAFTKSSCLPANMYFPEVCDIHLRL 451

Query: 30   IERCKSSDPF 1
            IE  K+ D F
Sbjct: 452  IEWSKNPDDF 461


>dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thaliana]
            gi|18176330|gb|AAL60024.1| unknown protein [Arabidopsis
            thaliana] gi|20465375|gb|AAM20091.1| unknown protein
            [Arabidopsis thaliana]
          Length = 662

 Score =  367 bits (942), Expect = 4e-99
 Identities = 190/433 (43%), Positives = 285/433 (65%), Gaps = 19/433 (4%)
 Frame = -3

Query: 1242 WNDFERVKKGDVMVAICKHCNKKLSASATSGTSHLKNHLTRCRKRANRELTQKLLLVRGK 1063
            WN FERV+K DV  A+C  CNKKLS S+ SGT+HL+NHL RC KR N +++Q L   R K
Sbjct: 21   WNYFERVRKADVCYAVCIQCNKKLSGSSNSGTTHLRNHLMRCLKRTNHDMSQLLTPKRRK 80

Query: 1062 QRD----GNIKFEQDYGPLDF---KFDQEQSQLRL--------KFDQDRSRCDLARMIIV 928
            + +      I F+      ++   KFDQ+Q +  +        +F Q+RS+ DLARMII+
Sbjct: 81   KENPVTVATINFDDGQAKEEYLRPKFDQDQRRDEVVLSRGSGGRFSQERSQVDLARMIIL 140

Query: 927  HEYPLSMVEHAGFRRFVTNLQPLFQPMSCEAVKSDCVQIYGKEKQKVYEMLDKVPGRISL 748
            H YPL+MV+H GF+ F  NLQPLF+ +    ++  C++IY +EKQ+V   L+ + G+++L
Sbjct: 141  HNYPLAMVDHVGFKVFARNLQPLFEAVPNSTIEDSCMEIYIREKQRVQHTLNHLYGKVNL 200

Query: 747  TADLCTSYQDNGYMCLTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCLMEWDID 571
            + ++ +S  ++ Y+CL ++Y DE   L + VLNF+ +DP H+E  L+EVI  CL+EW ++
Sbjct: 201  SVEMWSSRDNSNYVCLASNYIDEEWRLHRNVLNFITLDPSHTEDMLSEVIIRCLIEWSLE 260

Query: 570  RKLFSMTFDKLFSNE-VVFRIRERLSQSRLLLNSGQLFHVRCATNILNMIVQNVLEALHE 394
             KLF++TFD +  NE +V RI++ +SQS  +L +GQLF ++ A ++LN +V++ LEA+ +
Sbjct: 261  NKLFAVTFDSVSVNEEIVLRIKDHMSQSSQILINGQLFELKSAAHLLNSLVEDCLEAMRD 320

Query: 393  VTHKIRESVRYVKSSDTIQQSFSEMAQQLIGDTQRSLCLDCPSQWNTTYAMIEAAIEYKI 214
            V  KIR SVRYVKSS + Q  F+E+AQ    ++Q+ L LD     N+T+ M+E  +EYK 
Sbjct: 321  VIQKIRGSVRYVKSSQSTQVRFNEIAQLAGINSQKILVLDSIVNSNSTFVMLETVLEYKG 380

Query: 213  AFSHLQECDSDYTLAPSDVEWERASTVCRYLKLFIEVANVFTG--AATANLYFPELCDIH 40
            AF HL++ D  +  + +D EWE    V  YLKL  ++A+ F+     TAN+YF E+CDIH
Sbjct: 381  AFCHLRDHDHSFDSSLTDEEWEWTRYVTGYLKLVFDIASDFSANKCPTANVYFAEMCDIH 440

Query: 39   LQLIERCKSSDPF 1
            +QL+E CK+ D F
Sbjct: 441  IQLVEWCKNQDNF 453


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