BLASTX nr result

ID: Coptis23_contig00027442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027442
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    79   6e-13
ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257...    62   5e-08
ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838...    62   7e-08
ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|2...    62   9e-08
gb|EEE55062.1| hypothetical protein OsJ_02776 [Oryza sativa Japo...    61   1e-07

>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 13/96 (13%)
 Frame = +1

Query: 1   PNSLSKAIGLARLFEAR------------DRVPIDSSSKAASTMPTTSVKQLTANELQGR 144
           P +LS A+GLARL+E +              V  +S+  +     T ++++L+  E++ R
Sbjct: 291 PPTLSAAVGLARLYEVKYHKRSSFNLEPKKTVSTNSTVTSRPLSSTPAIRRLSPTEMKER 350

Query: 145 RSKGLCFNCNEKFFPGHRCKKVFFIELC-NEEANGD 249
           R KGLCFNC+EKF PGHRCKK+F IE C  EE +GD
Sbjct: 351 RDKGLCFNCDEKFAPGHRCKKLFLIEGCWPEEDSGD 386


>ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
          Length = 787

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
 Frame = +1

Query: 1   PNSLSKAIGLARLFE---ARDR-----------VPIDSSSKAASTMPTTSVKQLTANELQ 138
           P SL + I LAR+ +   AR R           + +  +++    +P   +K L+  E+Q
Sbjct: 192 PQSLKEVINLARMRDDQIARQRRFMWLPPVRAPIALPQATRVDPAIPAKPIKSLSWEEMQ 251

Query: 139 GRRSKGLCFNCNEKFFPGHRCKKVFFIELCNEEANGD 249
            +R++GLCFNCNE+F  GHRC+K   + L   E N D
Sbjct: 252 RKRAQGLCFNCNERFTAGHRCQKPQLLLLKGHEGNVD 288


>ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838891 [Brachypodium
           distachyon]
          Length = 635

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%)
 Frame = +1

Query: 100 TTSVKQLTANELQGRRSKGLCFNCNEKFFPGHRCKKVFFIELCNEEANGDIAMENNESG* 279
           T   K+L A E++ R++KGLCFNC+EKF  GHRCK +F+IE+ ++E   D+ +       
Sbjct: 131 TPVFKKLNAAEMEERQAKGLCFNCDEKFVRGHRCKCLFYIEVADKEEEEDLQI------- 183

Query: 280 SSLMFVVPLRT 312
            SL+ +  +RT
Sbjct: 184 -SLLAITGVRT 193


>ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|222835888|gb|EEE74309.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 12/102 (11%)
 Frame = +1

Query: 1   PNSLSKAIGLARLFEA------RDRVPID-SSSKAASTMPTTS-----VKQLTANELQGR 144
           P SL +AI LAR+ +       R+  P   + +  AS  PT S     +K+L  +E+Q R
Sbjct: 228 PKSLKEAISLARMRDEQLTRQRRNSKPFSINHNPIASFSPTKSPAAMPMKRLAWDEMQKR 287

Query: 145 RSKGLCFNCNEKFFPGHRCKKVFFIELCNEEANGDIAMENNE 270
           RS+G+CFNC+EKF PGH+C+K   + L   E + + +++++E
Sbjct: 288 RSQGICFNCDEKFTPGHKCQKPRLLLL---EGDDETSLQDDE 326


>gb|EEE55062.1| hypothetical protein OsJ_02776 [Oryza sativa Japonica Group]
          Length = 692

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 36/119 (30%)
 Frame = +1

Query: 1   PNSLSKAIGLARLFEAR-------------DRVP---IDSSSKAASTMPTTSV------- 111
           P SL  AI LAR +E R              RVP   + +SS A+++  TTS        
Sbjct: 361 PRSLDDAIMLARAYEQRATLGPTDPSAPRTGRVPRPSLPASSAASASASTTSADVAASTA 420

Query: 112 ------------KQLTANELQGRRSKGLCFNCNEKFFPGHRCKKVFFIELCN-EEANGD 249
                       K+L+  E+  RRS+GLC+NC+EK+  GHRCKK F IE+ +  E  GD
Sbjct: 421 AGKQPLVSALPRKRLSPAEMAQRRSEGLCYNCDEKYVAGHRCKKSFVIEVISFPEDTGD 479


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