BLASTX nr result

ID: Coptis23_contig00027405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027405
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326135.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002516236.1| beta-galactosidase, putative [Ricinus commun...   135   3e-30
ref|XP_003612351.1| Beta-galactosidase [Medicago truncatula] gi|...   132   4e-29
ref|XP_003612510.1| Beta-galactosidase [Medicago truncatula] gi|...   131   6e-29
ref|XP_003547766.1| PREDICTED: beta-galactosidase 7-like [Glycin...   129   2e-28

>ref|XP_002326135.1| predicted protein [Populus trichocarpa] gi|222833328|gb|EEE71805.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/102 (67%), Positives = 78/102 (76%)
 Frame = -2

Query: 306 GIVGGPVQLLGTGSVNTTKDLSSNLWSYKVGLNGEKKKFYDSKSKESITGWEDEALPLRR 127
           GI GGPV+L+ +G  NTT DLSSN WSYKVGLNGE  +FYD  S  +   W    L + R
Sbjct: 561 GIAGGPVELIDSG--NTTTDLSSNEWSYKVGLNGEGGRFYDPTSGRA--KWVSGNLRVGR 616

Query: 126 PMTWYKTTFKAPLGRDPVVVDLQGMGKGHAWVNGHSLGRFWP 1
            MTWYKTTF+AP G +PVVVDLQGMGKGHAWVNG+SLGRFWP
Sbjct: 617 AMTWYKTTFQAPSGTEPVVVDLQGMGKGHAWVNGNSLGRFWP 658


>ref|XP_002516236.1| beta-galactosidase, putative [Ricinus communis]
           gi|223544722|gb|EEF46238.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 775

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/103 (64%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = -2

Query: 306 GIVGGPVQLLGTGSVNTTKDLSSNLWSYKVGLNGEKKKFYDSKSKESITGWED-EALPLR 130
           GIV GPVQL+  G      DLSSNLWSYK+GLNGE K+FYD  S+ +   W     +   
Sbjct: 498 GIVDGPVQLMANGK--PVMDLSSNLWSYKIGLNGEAKRFYDPTSRHN--KWSAANGVSTA 553

Query: 129 RPMTWYKTTFKAPLGRDPVVVDLQGMGKGHAWVNGHSLGRFWP 1
           RPMTWYKTTF +P G DPVVVDLQGMGKGHAW NG SLGR+WP
Sbjct: 554 RPMTWYKTTFSSPSGTDPVVVDLQGMGKGHAWANGKSLGRYWP 596


>ref|XP_003612351.1| Beta-galactosidase [Medicago truncatula]
           gi|355513686|gb|AES95309.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 806

 Score =  132 bits (331), Expect = 4e-29
 Identities = 57/103 (55%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
 Frame = -2

Query: 306 GIVGGPVQLLGTGSVNTTKDLSSNLWSYKVGLNGEKKKFYDSKSKESITGWEDEA--LPL 133
           GI GGPV+L+G    N T DLS+NLWSYK+GLNGE++  YD++   S+  W   +  +P+
Sbjct: 545 GISGGPVELIGKN--NVTMDLSTNLWSYKIGLNGERRHLYDAQQNVSVA-WHTNSSYIPI 601

Query: 132 RRPMTWYKTTFKAPLGRDPVVVDLQGMGKGHAWVNGHSLGRFW 4
            +P+ WY+  FK+P G +P+VVDLQG+GKGHAWVNGHS+GR+W
Sbjct: 602 GKPLIWYRAKFKSPFGTNPIVVDLQGLGKGHAWVNGHSIGRYW 644


>ref|XP_003612510.1| Beta-galactosidase [Medicago truncatula]
           gi|355513845|gb|AES95468.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 828

 Score =  131 bits (329), Expect = 6e-29
 Identities = 59/101 (58%), Positives = 77/101 (76%)
 Frame = -2

Query: 306 GIVGGPVQLLGTGSVNTTKDLSSNLWSYKVGLNGEKKKFYDSKSKESITGWEDEALPLRR 127
           GI  GPV+L+G  SV  T DLS+  WS+KVGLNGEK++FYD + +  +  W   + P  +
Sbjct: 559 GISDGPVKLVGQNSV--TIDLSTGNWSFKVGLNGEKRRFYDLQPRSGVA-WNTSSYPTGK 615

Query: 126 PMTWYKTTFKAPLGRDPVVVDLQGMGKGHAWVNGHSLGRFW 4
           P+TWYKT FK+PLG +P+VVDLQG+GKGHAWVNG S+GR+W
Sbjct: 616 PLTWYKTQFKSPLGPNPIVVDLQGLGKGHAWVNGKSIGRYW 656


>ref|XP_003547766.1| PREDICTED: beta-galactosidase 7-like [Glycine max]
          Length = 826

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/101 (58%), Positives = 73/101 (72%)
 Frame = -2

Query: 306 GIVGGPVQLLGTGSVNTTKDLSSNLWSYKVGLNGEKKKFYDSKSKESITGWEDEALPLRR 127
           GI GGPVQL+G    N T DLS+NLWSYK+GLNGEKK+ YD + +  ++   +   P+ R
Sbjct: 560 GIAGGPVQLIGNN--NETIDLSTNLWSYKIGLNGEKKRLYDPQPRIGVSWRTNSPYPIGR 617

Query: 126 PMTWYKTTFKAPLGRDPVVVDLQGMGKGHAWVNGHSLGRFW 4
            +TWYK  F AP G DPVVVDL G+GKG AWVNG S+GR+W
Sbjct: 618 SLTWYKADFVAPSGNDPVVVDLLGLGKGEAWVNGQSIGRYW 658


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