BLASTX nr result

ID: Coptis23_contig00027401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027401
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]    79   5e-13
emb|CAN84014.1| hypothetical protein VITISV_036140 [Vitis vinifera]    77   2e-12
emb|CAN68674.1| hypothetical protein VITISV_012344 [Vitis vinifera]    77   2e-12
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    75   5e-12
emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]    75   5e-12

>emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]
          Length = 1776

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
 Frame = +1

Query: 43   IDCVELPSVGSKGGVCILWDKDKVEVFDNLVGVFSVSILCKF-SGEESSKLVTAVYGPPN 219
            ++   LP+ G+ GG  ILWD  K+E  + + G FSV++  KF SGEE S  +T+VYGP N
Sbjct: 727  VEWAALPACGASGGXVILWDSSKLECTEKVXGSFSVTV--KFNSGEEGSFWLTSVYGPXN 784

Query: 220  KDF-SSFWNELDDVYAFSSGGPWCIAGDFNVIRFSHEK 330
              +   FW EL D++  +    WC+ GDFNVIR   EK
Sbjct: 785  PLWRKDFWLELQDLFGLTF-PRWCVGGDFNVIRRISEK 821


>emb|CAN84014.1| hypothetical protein VITISV_036140 [Vitis vinifera]
          Length = 940

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
 Frame = +1

Query: 43  IDCVELPSVGSKGGVCILWDKDKVEVFDNLVGVFSVSILCKFSGEESSKLVTAVYGPPNK 222
           I+   LP+ G+ GG+ I+WD +K++  + ++G F V++   F GEE S  +T+VYG PNK
Sbjct: 449 IEWAVLPACGTSGGIVIIWDSNKLKCTEKVLGSFFVTVKLNF-GEEGSFWLTSVYG-PNK 506

Query: 223 DF--SSFWNELDDVYAFSSGGPWCIAGDFNVIRFSHEK 330
                 FW EL D+Y  +    WC+ GDFNVIR   EK
Sbjct: 507 PLWRRDFWLELQDLYGLTF-PMWCVGGDFNVIRRISEK 543


>emb|CAN68674.1| hypothetical protein VITISV_012344 [Vitis vinifera]
          Length = 1171

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/92 (41%), Positives = 57/92 (61%)
 Frame = +1

Query: 40  NIDCVELPSVGSKGGVCILWDKDKVEVFDNLVGVFSVSILCKFSGEESSKLVTAVYGPPN 219
           +++   LP  G+  G+ ILWD +K +  + ++G FSV++   F GEE S  +T+VYGP  
Sbjct: 661 SLEWAALPXCGASRGIVILWDSNKFKCTEKVLGSFSVTVKLNF-GEEGSFWLTSVYGPNK 719

Query: 220 KDFSSFWNELDDVYAFSSGGPWCIAGDFNVIR 315
             +  FW +L D+Y  S+   WC+ GDFNVIR
Sbjct: 720 PLWRDFWLKLQDLYG-STFPRWCVGGDFNVIR 750


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +1

Query: 40   NIDCVELPSVGSKGGVCILWDKDKVEVFDNLVGVFSVSILCKFSGEESSKLVTAVYGPPN 219
            N D   LP+ G+ GG+ I+WD  K+   + ++G FSVSI    +G ES  L +AVYGP N
Sbjct: 884  NKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWL-SAVYGPNN 942

Query: 220  KDF-SSFWNELDDVYAFSSGGPWCIAGDFNVIRFSHEK 330
                   W EL D+   +S   WC+ GDFNVIR S EK
Sbjct: 943  SALRKDLWVELSDIAGLAS-PRWCVGGDFNVIRRSSEK 979


>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 46/98 (46%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +1

Query: 40   NIDCVELPSVGSKGGVCILWDKDKVEVFDNLVGVFSVSILCKFSGEESSKLVTAVYGPPN 219
            N D   LP+ G+ GG+ I+WD  K+   + ++G FSVSI     G ES  L +AVYGP N
Sbjct: 811  NKDWAALPASGASGGILIIWDSIKMRREEVVLGSFSVSIKFAMDGCESLWL-SAVYGPNN 869

Query: 220  KDF-SSFWNELDDVYAFSSGGPWCIAGDFNVIRFSHEK 330
                  FW EL D+ A  S   WC+ GDFNVIR S EK
Sbjct: 870  SALRKDFWVELSDI-AGLSHPRWCVGGDFNVIRRSSEK 906


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