BLASTX nr result

ID: Coptis23_contig00027399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027399
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV43357.1| auxin-response factor [Citrus sinensis]                278   3e-95
ref|XP_002322300.1| predicted protein [Populus trichocarpa] gi|2...   273   3e-94
emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]   275   7e-94
ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vi...   275   7e-94
ref|XP_002318767.1| predicted protein [Populus trichocarpa] gi|2...   273   2e-93

>gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  278 bits (712), Expect(2) = 3e-95
 Identities = 135/149 (90%), Positives = 139/149 (93%)
 Frame = +2

Query: 194 SKILCRVINVELKAEPDTDEVFAQVTLLPEDNQDENSVEKEPLPTSPTRPVVHSFCKTLT 373
           SKILCRVINV+LKAEPDTDEVFAQVTLLPE NQDEN+VEKEP P  P R  VHSFCKTLT
Sbjct: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156

Query: 374 ASDTSTHGGFSVLRRHADECLPPLDMGRQPPTQDLVAKDLHGMEWRFRHIFRGQPRRHLL 553
           ASDTSTHGGFSVLRRHADECLPPLDM RQPPTQ+L AKDLHG EWRFRHIFRGQPRRHLL
Sbjct: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216

Query: 554 QSGWSVFVSAKRLVAGDAFIFLRGENGEL 640
           QSGWSVFVS+KRLVAGDAFIFLRGENGEL
Sbjct: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGEL 245



 Score = 96.3 bits (238), Expect(2) = 3e-95
 Identities = 41/48 (85%), Positives = 47/48 (97%)
 Frame = +1

Query: 1   LWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQISDQQLPDYNLP 144
           LWHACAGPLVTVPREG+RV+YFPQGHIEQVEASTNQ++DQQ+P Y+LP
Sbjct: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP 96


>ref|XP_002322300.1| predicted protein [Populus trichocarpa] gi|222869296|gb|EEF06427.1|
           predicted protein [Populus trichocarpa]
          Length = 852

 Score =  273 bits (699), Expect(2) = 3e-94
 Identities = 132/148 (89%), Positives = 138/148 (93%)
 Frame = +2

Query: 197 KILCRVINVELKAEPDTDEVFAQVTLLPEDNQDENSVEKEPLPTSPTRPVVHSFCKTLTA 376
           KILCRV+NV+LKAEPDTDEVFAQVTLLPE NQDE+ +EKEP P  P R  VHSFCKTLTA
Sbjct: 105 KILCRVVNVQLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLTA 164

Query: 377 SDTSTHGGFSVLRRHADECLPPLDMGRQPPTQDLVAKDLHGMEWRFRHIFRGQPRRHLLQ 556
           SDTSTHGGFSVLRRHADECLPPLDM RQPPTQ+LVAKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 165 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQ 224

Query: 557 SGWSVFVSAKRLVAGDAFIFLRGENGEL 640
           SGWSVFVS+KRLVAGDAFIFLRGENGEL
Sbjct: 225 SGWSVFVSSKRLVAGDAFIFLRGENGEL 252



 Score = 97.8 bits (242), Expect(2) = 3e-94
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +1

Query: 1   LWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQISDQQLPDYNL 141
           LWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQ++DQQ+P YNL
Sbjct: 56  LWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLYNL 102


>emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
          Length = 946

 Score =  275 bits (702), Expect(2) = 7e-94
 Identities = 134/149 (89%), Positives = 138/149 (92%)
 Frame = +2

Query: 194 SKILCRVINVELKAEPDTDEVFAQVTLLPEDNQDENSVEKEPLPTSPTRPVVHSFCKTLT 373
           SKILCRVINV+LKAEPDTDEVFAQVTLLPE NQDE + EKEPLP  P R  VHSFCKTLT
Sbjct: 109 SKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLT 168

Query: 374 ASDTSTHGGFSVLRRHADECLPPLDMGRQPPTQDLVAKDLHGMEWRFRHIFRGQPRRHLL 553
           ASDTSTHGGFSVLRRHADECLP LDM RQPPTQ+LVAKDLHG EWRFRHIFRGQPRRHLL
Sbjct: 169 ASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLL 228

Query: 554 QSGWSVFVSAKRLVAGDAFIFLRGENGEL 640
           QSGWSVFVS+KRLVAGDAFIFLRGENGEL
Sbjct: 229 QSGWSVFVSSKRLVAGDAFIFLRGENGEL 257



 Score = 95.5 bits (236), Expect(2) = 7e-94
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +1

Query: 1   LWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQISDQQLPDYNLP 144
           LWHACAGPLVTVPRE +RVFYFPQGHIEQVEASTNQ+SDQQ+P Y+LP
Sbjct: 61  LWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLP 108


>ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
           gi|297734502|emb|CBI15749.3| unnamed protein product
           [Vitis vinifera]
          Length = 862

 Score =  275 bits (702), Expect(2) = 7e-94
 Identities = 134/149 (89%), Positives = 138/149 (92%)
 Frame = +2

Query: 194 SKILCRVINVELKAEPDTDEVFAQVTLLPEDNQDENSVEKEPLPTSPTRPVVHSFCKTLT 373
           SKILCRVINV+LKAEPDTDEVFAQVTLLPE NQDE + EKEPLP  P R  VHSFCKTLT
Sbjct: 109 SKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLT 168

Query: 374 ASDTSTHGGFSVLRRHADECLPPLDMGRQPPTQDLVAKDLHGMEWRFRHIFRGQPRRHLL 553
           ASDTSTHGGFSVLRRHADECLP LDM RQPPTQ+LVAKDLHG EWRFRHIFRGQPRRHLL
Sbjct: 169 ASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLL 228

Query: 554 QSGWSVFVSAKRLVAGDAFIFLRGENGEL 640
           QSGWSVFVS+KRLVAGDAFIFLRGENGEL
Sbjct: 229 QSGWSVFVSSKRLVAGDAFIFLRGENGEL 257



 Score = 95.5 bits (236), Expect(2) = 7e-94
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +1

Query: 1   LWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQISDQQLPDYNLP 144
           LWHACAGPLVTVPRE +RVFYFPQGHIEQVEASTNQ+SDQQ+P Y+LP
Sbjct: 61  LWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLP 108


>ref|XP_002318767.1| predicted protein [Populus trichocarpa] gi|222859440|gb|EEE96987.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  273 bits (697), Expect(2) = 2e-93
 Identities = 132/148 (89%), Positives = 137/148 (92%)
 Frame = +2

Query: 197 KILCRVINVELKAEPDTDEVFAQVTLLPEDNQDENSVEKEPLPTSPTRPVVHSFCKTLTA 376
           KILCRV+NV+LKAEPDTDEVFAQVTLLP  NQDEN+ EKEP P  P R  VHSFCKTLTA
Sbjct: 103 KILCRVVNVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPPRFHVHSFCKTLTA 162

Query: 377 SDTSTHGGFSVLRRHADECLPPLDMGRQPPTQDLVAKDLHGMEWRFRHIFRGQPRRHLLQ 556
           SDTSTHGGFSVLRRHADECLPPLDM RQPPTQ+LVAKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 163 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQ 222

Query: 557 SGWSVFVSAKRLVAGDAFIFLRGENGEL 640
           SGWSVFVS+KRLVAGDAFIFLRGENGEL
Sbjct: 223 SGWSVFVSSKRLVAGDAFIFLRGENGEL 250



 Score = 95.9 bits (237), Expect(2) = 2e-93
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +1

Query: 1   LWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQISDQQLPDYNLP 144
           LWHACAGPLVTVPREGD VFYFPQGH+EQVEASTNQ++DQQ+P Y+LP
Sbjct: 54  LWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQVADQQMPLYDLP 101


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