BLASTX nr result

ID: Coptis23_contig00027397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027397
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266341.1| PREDICTED: probable polygalacturonase non-ca...   141   5e-32
ref|XP_004173618.1| PREDICTED: probable polygalacturonase non-ca...   141   6e-32
ref|XP_004142981.1| PREDICTED: probable polygalacturonase non-ca...   141   6e-32
ref|XP_002266815.1| PREDICTED: probable polygalacturonase non-ca...   134   6e-30
ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28

>ref|XP_002266341.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP630-like [Vitis vinifera]
          Length = 633

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/104 (60%), Positives = 77/104 (74%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y++ VNVPNLRF SY  D + R+  F SY+++TN+G+++F+SYGKN NG P EFTSYG  
Sbjct: 204 YNEEVNVPNLRFNSYTDDGNGRQQSFTSYTNETNSGDESFSSYGKNGNGSPNEFTSYGSS 263

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NVIGSTFT YGE GN A +TF SY FD N P+N F  Y DGGN
Sbjct: 264 SNVIGSTFTGYGETGNAANDTFKSYGFDGNVPENNFKKYGDGGN 307



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/104 (36%), Positives = 54/104 (51%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y + VN+P   F  Y  DS    + FD+Y  + N  +Q+F+ YG  + G   EF  Y + 
Sbjct: 148 YSEGVNLPVDAFKRYSRDSVGNNDKFDNYGREGNVVDQSFSGYGAGATGGSGEFKKYNEE 207

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NV    F +Y + GNG   +FTSY  +TN+    F+SY   GN
Sbjct: 208 VNVPNLRFNSYTDDGNGRQQSFTSYTNETNSGDESFSSYGKNGN 251



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/101 (35%), Positives = 51/101 (50%)
 Frame = +2

Query: 11  FVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKGGNV 190
           F    N  FT+YG+D     + F  YS+  N    AF  Y ++S G   +F +YG+ GNV
Sbjct: 123 FAVYSNKNFTNYGTDGLGGTDAFTKYSEGVNLPVDAFKRYSRDSVGNNDKFDNYGREGNV 182

Query: 191 IGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
           +  +F+ YG    G +  F  Y  + N P  +F SY D GN
Sbjct: 183 VDQSFSGYGAGATGGSGEFKKYNEEVNVPNLRFNSYTDDGN 223



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/99 (36%), Positives = 42/99 (42%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y +  N  N  F SYG D +  +N F  Y D  NAG   F SY   SN     F SY K 
Sbjct: 274 YGETGNAANDTFKSYGFDGNVPENNFKKYGDGGNAGTDTFISYRDQSNVGDDSFKSYAKN 333

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASY 298
            N     F  YG+  N  T+TF  Y     N +  F  Y
Sbjct: 334 SNSAEVDFVNYGKSFNEGTDTFAGYGKGATNHKINFKIY 372



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/102 (32%), Positives = 40/102 (39%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y    NV    FT YG   +A  + F SY  D N     F  YG   N     F SY   
Sbjct: 260 YGSSSNVIGSTFTGYGETGNAANDTFKSYGFDGNVPENNFKKYGDGGNAGTDTFISYRDQ 319

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDG 307
            NV   +F +Y +  N A   F +Y    N   + FA Y  G
Sbjct: 320 SNVGDDSFKSYAKNSNSAEVDFVNYGKSFNEGTDTFAGYGKG 361



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
 Frame = +2

Query: 17  NVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSY-------- 172
           NVP   F  YG   +A  + F SY D +N G+ +F SY KNSN    +F +Y        
Sbjct: 293 NVPENNFKKYGDGGNAGTDTFISYRDQSNVGDDSFKSYAKNSNSAEVDFVNYGKSFNEGT 352

Query: 173 ------GKGGNVIGSTFTAYGEQGNGATNTFTSYA 259
                 GKG       F  Y     G  NTFT YA
Sbjct: 353 DTFAGYGKGATNHKINFKIY-----GVNNTFTDYA 382


>ref|XP_004173618.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like, partial [Cucumis sativus]
          Length = 612

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/104 (60%), Positives = 77/104 (74%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y+Q VNVPNLRFT+Y SD+  R   F SYS++ NAG+Q+F +YGK  NG P EFT YG  
Sbjct: 184 YEQSVNVPNLRFTTYSSDATGRSQSFKSYSENANAGDQSFVNYGKRGNGGPNEFTGYGTS 243

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NVIGS F++YG +GNGA +TFT+Y  D NNPQN F SY +GGN
Sbjct: 244 ANVIGSRFSSYGAEGNGANDTFTNYGNDQNNPQNNFRSYGEGGN 287



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/104 (34%), Positives = 50/104 (48%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y    NV   RF+SYG++ +   + F +Y +D N     F SYG+  NG    F+SY   
Sbjct: 240 YGTSANVIGSRFSSYGAEGNGANDTFTNYGNDQNNPQNNFRSYGEGGNGAIESFSSYRDQ 299

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NV   +F +Y +  N A   F SY    N   +KF+ Y   GN
Sbjct: 300 ANVGDDSFQSYSKNSNSAKVNFASYGKSFNEGTDKFSGYGQNGN 343



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/89 (39%), Positives = 43/89 (48%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y    N P   F SYG   +     F SY D  N G+ +F SY KNSN     F SYGK 
Sbjct: 268 YGNDQNNPQNNFRSYGEGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSAKVNFASYGKS 327

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDT 268
            N     F+ YG+ GNG +  F +Y  +T
Sbjct: 328 FNEGTDKFSGYGQNGNGQSVGFKTYGVNT 356


>ref|XP_004142981.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Cucumis sativus]
          Length = 623

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/104 (60%), Positives = 77/104 (74%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y+Q VNVPNLRFT+Y SD+  R   F SYS++ NAG+Q+F +YGK  NG P EFT YG  
Sbjct: 195 YEQSVNVPNLRFTTYSSDATGRSQSFKSYSENANAGDQSFVNYGKRGNGGPNEFTGYGTS 254

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NVIGS F++YG +GNGA +TFT+Y  D NNPQN F SY +GGN
Sbjct: 255 ANVIGSRFSSYGAEGNGANDTFTNYGNDQNNPQNNFRSYGEGGN 298



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/104 (34%), Positives = 50/104 (48%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y    NV   RF+SYG++ +   + F +Y +D N     F SYG+  NG    F+SY   
Sbjct: 251 YGTSANVIGSRFSSYGAEGNGANDTFTNYGNDQNNPQNNFRSYGEGGNGAIESFSSYRDQ 310

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NV   +F +Y +  N A   F SY    N   +KF+ Y   GN
Sbjct: 311 ANVGDDSFQSYSKNSNSAKVNFASYGKSFNEGTDKFSGYGQNGN 354



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/89 (39%), Positives = 43/89 (48%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y    N P   F SYG   +     F SY D  N G+ +F SY KNSN     F SYGK 
Sbjct: 279 YGNDQNNPQNNFRSYGEGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSAKVNFASYGKS 338

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDT 268
            N     F+ YG+ GNG +  F +Y  +T
Sbjct: 339 FNEGTDKFSGYGQNGNGQSVGFKTYGVNT 367


>ref|XP_002266815.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Vitis vinifera]
          Length = 624

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/104 (61%), Positives = 72/104 (69%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y +  NVPN+RF SY SD + RK  F SYS ++NAG+Q FTSYGKNS G P EFTSYG+ 
Sbjct: 195 YSEESNVPNVRFNSYSSDGNTRKQSFRSYSTESNAGDQYFTSYGKNSQGSPNEFTSYGEN 254

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NVIGSTFT YG   N A + FTSY F  N P N F SY DGGN
Sbjct: 255 TNVIGSTFTGYGRTANAANDKFTSYGFGGNVPVNNFKSYGDGGN 298



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
 Frame = +2

Query: 17  NVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKGGNVIG 196
           NVP   F SYG   ++  + F SY + +N G+ +F SY KNS+     F +YG+  N   
Sbjct: 284 NVPVNNFKSYGDGGNSGIDTFKSYRNQSNVGDDSFRSYAKNSHSAEVNFANYGQSFNEGT 343

Query: 197 STFTAYGEQGN---------GATNTFTSYA 259
            TFT YG+            G  NTFT YA
Sbjct: 344 DTFTGYGKGATGHKIGFKFYGVNNTFTDYA 373



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/85 (38%), Positives = 40/85 (47%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y +  N  N +FTSYG   +   N F SY D  N+G   F SY   SN     F SY K 
Sbjct: 265 YGRTANAANDKFTSYGFGGNVPVNNFKSYGDGGNSGIDTFKSYRNQSNVGDDSFRSYAKN 324

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSY 256
            +     F  YG+  N  T+TFT Y
Sbjct: 325 SHSAEVNFANYGQSFNEGTDTFTGY 349



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/96 (29%), Positives = 40/96 (41%)
 Frame = +2

Query: 26  NLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKGGNVIGSTF 205
           N  F +YG + +     F+ Y      G   F  Y + SN     F SY   GN    +F
Sbjct: 161 NDNFDNYGPEGNTMDLSFNGYGSGATRGVGEFKKYSEESNVPNVRFNSYSSDGNTRKQSF 220

Query: 206 TAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            +Y  + N     FTSY  ++    N+F SY +  N
Sbjct: 221 RSYSTESNAGDQYFTSYGKNSQGSPNEFTSYGENTN 256


>ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  127 bits (319), Expect = 9e-28
 Identities = 55/104 (52%), Positives = 75/104 (72%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y+  +N P+LRF SY   ++ +   F +Y++D NAG++AFTSYGKN NG+P EF+ YGK 
Sbjct: 181 YNVRINKPDLRFVSYSDGANGKGQKFSTYTEDANAGDEAFTSYGKNGNGVPNEFSGYGKS 240

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            NVIGS F+ YGE GNGA++TF +Y  D N P+N + +Y DGGN
Sbjct: 241 SNVIGSDFSNYGEAGNGASDTFKTYGVDGNVPENNYKNYGDGGN 284



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/96 (34%), Positives = 45/96 (46%)
 Frame = +2

Query: 26  NLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKGGNVIGSTF 205
           N  FT+YG+      + F +YSD  N    +F  YG+++ G    F++Y    NV   +F
Sbjct: 105 NKNFTNYGTGRAGGADSFKNYSDGVNLPVDSFRRYGRDAAGHDETFSNYAPETNVADQSF 164

Query: 206 TAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
             YG    G T  F  Y    N P  +F SY DG N
Sbjct: 165 NTYGAGATGGTGEFKGYNVRINKPDLRFVSYSDGAN 200



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/104 (30%), Positives = 51/104 (49%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y    NV +  F +YG+ +      F  Y+   N  +  F SY   +NG   +F++Y + 
Sbjct: 153 YAPETNVADQSFNTYGAGATGGTGEFKGYNVRINKPDLRFVSYSDGANGKGQKFSTYTED 212

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASYDDGGN 313
            N     FT+YG+ GNG  N F+ Y   +N   + F++Y + GN
Sbjct: 213 ANAGDEAFTSYGKNGNGVPNEFSGYGKSSNVIGSDFSNYGEAGN 256



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/84 (34%), Positives = 42/84 (50%)
 Frame = +2

Query: 17  NVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKGGNVIG 196
           NVP   + +YG   +   + F +Y + +N G+ +F SY KNSN    +F +YGK  N   
Sbjct: 270 NVPENNYKNYGDGGNGGVDSFANYREKSNVGDDSFQSYAKNSNAQKADFVNYGKSFNEGT 329

Query: 197 STFTAYGEQGNGATNTFTSYAFDT 268
             FT YG+   G    F  Y  +T
Sbjct: 330 DKFTGYGKGAVGQQIGFKIYGVNT 353



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/99 (31%), Positives = 44/99 (44%)
 Frame = +2

Query: 2   YDQFVNVPNLRFTSYGSDSDARKNGFDSYSDDTNAGNQAFTSYGKNSNGLPTEFTSYGKG 181
           Y +  N  +  F +YG D +  +N + +Y D  N G  +F +Y + SN     F SY K 
Sbjct: 251 YGEAGNGASDTFKTYGVDGNVPENNYKNYGDGGNGGVDSFANYREKSNVGDDSFQSYAKN 310

Query: 182 GNVIGSTFTAYGEQGNGATNTFTSYAFDTNNPQNKFASY 298
            N   + F  YG+  N  T+ FT Y       Q  F  Y
Sbjct: 311 SNAQKADFVNYGKSFNEGTDKFTGYGKGAVGQQIGFKIY 349


Top