BLASTX nr result

ID: Coptis23_contig00027385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027385
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...   182   2e-44
emb|CBI25172.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   181   4e-44
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...   181   4e-44
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   178   5e-43

>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
          Length = 2377

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/120 (75%), Positives = 108/120 (90%)
 Frame = +2

Query: 5    EVEAAGGLEINIKEGGMSFSVGQRQLLCLVRALLKSSKVLCLDECSANIDTQTASSLQIA 184
            E+EAAGGL+ ++KE G+SFSVGQRQLLCLVRALLKSSKVLCLDEC+ANIDTQTA+ LQ  
Sbjct: 2258 EIEAAGGLDFHVKESGLSFSVGQRQLLCLVRALLKSSKVLCLDECTANIDTQTAALLQNT 2317

Query: 185  ISSHCENMTVLTIAHRISTVMNMNNILILDQGVLVEQGDPQALLQDESSRFSSFANASIM 364
            IS+ C  MTV+TIAHRISTV+NM++ILILD G+LVEQG+PQ LL++ESS+FS+F NAS M
Sbjct: 2318 ISNECRGMTVITIAHRISTVLNMDDILILDYGILVEQGNPQDLLENESSKFSNFVNASKM 2377


>emb|CBI25172.3| unnamed protein product [Vitis vinifera]
          Length = 1205

 Score =  181 bits (460), Expect = 4e-44
 Identities = 91/121 (75%), Positives = 105/121 (86%)
 Frame = +2

Query: 2    DEVEAAGGLEINIKEGGMSFSVGQRQLLCLVRALLKSSKVLCLDECSANIDTQTASSLQI 181
            +EVE AGGL+I++KE G SFSVGQRQLLCL RALLKSSKVLCLDEC+ANID QT+S LQ 
Sbjct: 1085 EEVEVAGGLDIHVKESGTSFSVGQRQLLCLARALLKSSKVLCLDECTANIDAQTSSVLQN 1144

Query: 182  AISSHCENMTVLTIAHRISTVMNMNNILILDQGVLVEQGDPQALLQDESSRFSSFANASI 361
            AI + C  MTV+TIAHRISTV++M+NILILD+G+LVEQG+PQ LLQD SSRFS FA AS 
Sbjct: 1145 AILTECRGMTVITIAHRISTVLSMDNILILDRGILVEQGNPQVLLQDHSSRFSGFAKAST 1204

Query: 362  M 364
            M
Sbjct: 1205 M 1205


>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  181 bits (460), Expect = 4e-44
 Identities = 91/121 (75%), Positives = 105/121 (86%)
 Frame = +2

Query: 2    DEVEAAGGLEINIKEGGMSFSVGQRQLLCLVRALLKSSKVLCLDECSANIDTQTASSLQI 181
            +EVE AGGL+I++KE G SFSVGQRQLLCL RALLKSSKVLCLDEC+ANID QT+S LQ 
Sbjct: 1185 EEVEVAGGLDIHVKESGTSFSVGQRQLLCLARALLKSSKVLCLDECTANIDAQTSSVLQN 1244

Query: 182  AISSHCENMTVLTIAHRISTVMNMNNILILDQGVLVEQGDPQALLQDESSRFSSFANASI 361
            AI + C  MTV+TIAHRISTV++M+NILILD+G+LVEQG+PQ LLQD SSRFS FA AS 
Sbjct: 1245 AILTECRGMTVITIAHRISTVLSMDNILILDRGILVEQGNPQVLLQDHSSRFSGFAKAST 1304

Query: 362  M 364
            M
Sbjct: 1305 M 1305


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score =  181 bits (460), Expect = 4e-44
 Identities = 92/121 (76%), Positives = 104/121 (85%)
 Frame = +2

Query: 2    DEVEAAGGLEINIKEGGMSFSVGQRQLLCLVRALLKSSKVLCLDECSANIDTQTASSLQI 181
            +EVEA GGL+I +KE G SFSVGQRQLLCL RALLKSSKVLCLDEC+ANIDTQTAS LQ 
Sbjct: 1337 EEVEALGGLDIEVKESGTSFSVGQRQLLCLARALLKSSKVLCLDECTANIDTQTASKLQN 1396

Query: 182  AISSHCENMTVLTIAHRISTVMNMNNILILDQGVLVEQGDPQALLQDESSRFSSFANASI 361
            AI++ C   TV+TIAHRISTV+NM+NILILDQG+LVEQG+P  LLQD+SS FSSF  AS 
Sbjct: 1397 AIANECRGTTVITIAHRISTVLNMDNILILDQGILVEQGNPNVLLQDDSSLFSSFFRASK 1456

Query: 362  M 364
            M
Sbjct: 1457 M 1457


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1426

 Score =  178 bits (451), Expect = 5e-43
 Identities = 90/121 (74%), Positives = 106/121 (87%)
 Frame = +2

Query: 2    DEVEAAGGLEINIKEGGMSFSVGQRQLLCLVRALLKSSKVLCLDECSANIDTQTASSLQI 181
            +EVE+AGGL+I++KE G SFSVGQRQLLCL RALLK SKVLCLDEC+AN+DT+TAS L+ 
Sbjct: 1306 EEVESAGGLDIHVKESGSSFSVGQRQLLCLARALLKLSKVLCLDECTANVDTKTASILRS 1365

Query: 182  AISSHCENMTVLTIAHRISTVMNMNNILILDQGVLVEQGDPQALLQDESSRFSSFANASI 361
             I S C  MTV+TIAHRISTV+NM+NIL+LD+G LVEQG+P+ALLQDESS FSSFA AS 
Sbjct: 1366 TIFSECRAMTVITIAHRISTVLNMDNILVLDRGNLVEQGNPKALLQDESSIFSSFAKAST 1425

Query: 362  M 364
            M
Sbjct: 1426 M 1426


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