BLASTX nr result

ID: Coptis23_contig00027381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027381
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246...   322   3e-86
ref|XP_002317524.1| predicted protein [Populus trichocarpa] gi|2...   313   2e-83
gb|AFK47905.1| unknown [Medicago truncatula]                          312   3e-83
ref|XP_002533713.1| structural constituent of cell wall, putativ...   311   6e-83
gb|AFK40101.1| unknown [Lotus japonicus]                              309   3e-82

>ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246927 [Vitis vinifera]
           gi|302143064|emb|CBI20359.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  322 bits (825), Expect = 3e-86
 Identities = 150/205 (73%), Positives = 174/205 (84%)
 Frame = +3

Query: 3   VFYFHGRSNQHFSLISDPNLQINARLIGHRPNGRTRDYTWIQALGVMFDFHTFSVEAKKV 182
           VFYFHG+ N+HFSL+SD NLQINA  IG RP GRTRDYTWIQALG++ D H+FS+EA + 
Sbjct: 100 VFYFHGKRNEHFSLVSDLNLQINAHFIGLRPAGRTRDYTWIQALGILVDSHSFSLEATRA 159

Query: 183 EKWNDEVDQLQFTYDGKALEITEDHLSTWQSPEQEIKVERTSNMNSVTVTLTEYAEILIN 362
             W+DE+D L+F+YDGK L+I E HLS W   E ++KVERTSN NSV VTL E AEIL+N
Sbjct: 160 VAWDDEIDHLKFSYDGKELDIPEGHLSAWNFSENDLKVERTSNRNSVVVTLPEIAEILVN 219

Query: 363 VVPITEQDDKIHNYQIPSNDCFAHLEVQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAM 542
           VVPIT++DD+IHNYQIPS+DCFAHLEVQFRF GLS  VEGVLG+TY+PDF NP KPGVAM
Sbjct: 220 VVPITKEDDRIHNYQIPSDDCFAHLEVQFRFFGLSSKVEGVLGQTYQPDFENPVKPGVAM 279

Query: 543 PVVGGEDKYKTTSLLSSDCASCLFS 617
           PVVGGEDKY+TTSLLS+DC SCLFS
Sbjct: 280 PVVGGEDKYRTTSLLSADCRSCLFS 304


>ref|XP_002317524.1| predicted protein [Populus trichocarpa] gi|222860589|gb|EEE98136.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  313 bits (801), Expect = 2e-83
 Identities = 145/205 (70%), Positives = 177/205 (86%)
 Frame = +3

Query: 3   VFYFHGRSNQHFSLISDPNLQINARLIGHRPNGRTRDYTWIQALGVMFDFHTFSVEAKKV 182
           VFYFHG+SN+HFSL+SD NLQINAR IG RP GRTRD+TWIQALG++FD H+FS+EA + 
Sbjct: 65  VFYFHGKSNEHFSLVSDLNLQINARFIGLRPAGRTRDFTWIQALGILFDSHSFSLEATEA 124

Query: 183 EKWNDEVDQLQFTYDGKALEITEDHLSTWQSPEQEIKVERTSNMNSVTVTLTEYAEILIN 362
             WN EVD L+F+++G+ L I E  LSTWQSP+ +IKV+RTS+ NSV VTL E AEI IN
Sbjct: 125 STWNGEVDHLKFSHNGEDLIIPEGQLSTWQSPDSDIKVQRTSSKNSVLVTLPEVAEISIN 184

Query: 363 VVPITEQDDKIHNYQIPSNDCFAHLEVQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAM 542
           VVP+T++DD+IHNYQIPS+DCFAHLEVQF+F GLS  VEGV+GRTY+PDF NPAKPGVAM
Sbjct: 185 VVPVTKEDDRIHNYQIPSDDCFAHLEVQFQFFGLSSKVEGVIGRTYQPDFKNPAKPGVAM 244

Query: 543 PVVGGEDKYKTTSLLSSDCASCLFS 617
           PVVGGE+ ++TTSLLS+DC +C+FS
Sbjct: 245 PVVGGEEMFRTTSLLSADCGACVFS 269


>gb|AFK47905.1| unknown [Medicago truncatula]
          Length = 341

 Score =  312 bits (800), Expect = 3e-83
 Identities = 145/205 (70%), Positives = 170/205 (82%)
 Frame = +3

Query: 3   VFYFHGRSNQHFSLISDPNLQINARLIGHRPNGRTRDYTWIQALGVMFDFHTFSVEAKKV 182
           VFYFHGR N+HFSL+SD NLQINAR IG RP GR RDYTWIQALGV+FD H FS+EA   
Sbjct: 104 VFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALGVLFDSHNFSIEATPS 163

Query: 183 EKWNDEVDQLQFTYDGKALEITEDHLSTWQSPEQEIKVERTSNMNSVTVTLTEYAEILIN 362
             W+DEVD L+ +YDGK L I E HLSTWQS E +++VERTSN N V VT+ E AEI +N
Sbjct: 164 SIWDDEVDHLKLSYDGKDLVIPEGHLSTWQSEENQLRVERTSNENGVMVTIPEVAEISVN 223

Query: 363 VVPITEQDDKIHNYQIPSNDCFAHLEVQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAM 542
           VVP+T++D +IHNYQIP +DCFAHL+VQF+F GLS  VEGVLGRTY+PDF NPAKPGVAM
Sbjct: 224 VVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAM 283

Query: 543 PVVGGEDKYKTTSLLSSDCASCLFS 617
           PVVGGEDKY+T SL+S+DC +C+FS
Sbjct: 284 PVVGGEDKYRTKSLVSADCLACIFS 308


>ref|XP_002533713.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223526387|gb|EEF28676.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 340

 Score =  311 bits (797), Expect = 6e-83
 Identities = 140/205 (68%), Positives = 171/205 (83%)
 Frame = +3

Query: 3   VFYFHGRSNQHFSLISDPNLQINARLIGHRPNGRTRDYTWIQALGVMFDFHTFSVEAKKV 182
           VFYFHG+SN+HFSL+SD NLQIN R IGHRP GRTRD+TWIQALGV+F+  TFS+EA K 
Sbjct: 102 VFYFHGKSNEHFSLVSDTNLQINGRFIGHRPAGRTRDFTWIQALGVLFNTRTFSLEATKA 161

Query: 183 EKWNDEVDQLQFTYDGKALEITEDHLSTWQSPEQEIKVERTSNMNSVTVTLTEYAEILIN 362
             W+ E+D L+FTY+G+ L + E  LS W SPE+++KVER S+ NS  VTL +  EIL+N
Sbjct: 162 ATWDSEIDHLKFTYNGQDLVVPEGSLSIWYSPEKDVKVERVSSRNSAIVTLKDTVEILVN 221

Query: 363 VVPITEQDDKIHNYQIPSNDCFAHLEVQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAM 542
           VVP+T++DD++HNYQ+P+NDCF HLEVQFRF  LSP V+GVLGRTYRPDF NPAKPGVAM
Sbjct: 222 VVPVTKEDDRVHNYQVPANDCFVHLEVQFRFFNLSPKVDGVLGRTYRPDFENPAKPGVAM 281

Query: 543 PVVGGEDKYKTTSLLSSDCASCLFS 617
           PV+GGE+KY+T SLLS DC SC+FS
Sbjct: 282 PVLGGEEKYRTPSLLSPDCQSCIFS 306


>gb|AFK40101.1| unknown [Lotus japonicus]
          Length = 340

 Score =  309 bits (791), Expect = 3e-82
 Identities = 142/205 (69%), Positives = 171/205 (83%)
 Frame = +3

Query: 3   VFYFHGRSNQHFSLISDPNLQINARLIGHRPNGRTRDYTWIQALGVMFDFHTFSVEAKKV 182
           VFYFHGR ++HFSL+SD NLQINAR IG RP GR RDYTWIQALG++FD H FSVEA   
Sbjct: 103 VFYFHGRRDEHFSLVSDVNLQINARFIGLRPAGRPRDYTWIQALGILFDSHKFSVEATPS 162

Query: 183 EKWNDEVDQLQFTYDGKALEITEDHLSTWQSPEQEIKVERTSNMNSVTVTLTEYAEILIN 362
             W+DE+D+L+ +YDG  L+I E HLSTWQ  E ++++ERTS+ NSV +TL E AEI +N
Sbjct: 163 GIWDDEIDRLKISYDGSELDIPEGHLSTWQDQENQLRIERTSSKNSVLITLPEVAEISVN 222

Query: 363 VVPITEQDDKIHNYQIPSNDCFAHLEVQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAM 542
           VVP+T++D +IHNYQIP +DCFAHLEVQF+F GLS  VEGVLGRTY+PDF NPAKPGVAM
Sbjct: 223 VVPVTKEDSRIHNYQIPDDDCFAHLEVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAM 282

Query: 543 PVVGGEDKYKTTSLLSSDCASCLFS 617
           PVVGGEDKY+TTSL S+DC+ C+FS
Sbjct: 283 PVVGGEDKYRTTSLTSADCSVCMFS 307


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