BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027373
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    71   2e-10
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    66   6e-09
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    64   2e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   4e-08
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07

>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 46/118 (38%), Positives = 60/118 (50%), Gaps = 20/118 (16%)
 Frame = +2

Query: 14  DCFPLIEMITSKITNWKTRVLSYAGKLQLIISVLSSVHVYWSSSFMLPKSNCRKHSKHLF 193
           DC PLI+ ITS+I +W  RVLS+AG+LQL+ SVL S+ VYW+S FMLP    R   K L 
Sbjct: 52  DCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILR 111

Query: 194 F-------ECSFSRQVLWKV-------------SSGTWGLTQTLEMLIGSLVFSGYVW 307
                   E     +V W                  +W +  TL++L   LV SG +W
Sbjct: 112 SYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRDGSSWNIASTLKILWLLLVKSGSLW 169


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 29/56 (51%), Positives = 43/56 (76%)
 Frame = +2

Query: 8    IKDCFPLIEMITSKITNWKTRVLSYAGKLQLIISVLSSVHVYWSSSFMLPKSNCRK 175
            + DC PL+E I S+I++WK R LSYAG+LQL+ SV+SS+  +W S+F LP++  R+
Sbjct: 1038 LADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIRE 1093


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/118 (37%), Positives = 57/118 (48%), Gaps = 20/118 (16%)
 Frame = +2

Query: 14  DCFPLIEMITSKITNWKTRVLSYAGKLQLIISVLSSVHVYWSSSFMLP------------ 157
           DC PLI+ ITS+I +W  RVLS+A  LQL+  VL S+ VYW+S FMLP            
Sbjct: 237 DCDPLIQCITSRIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILR 296

Query: 158 ------KSNCRKHSKHLFFE--CSFSRQVLWKVSSGTWGLTQTLEMLIGSLVFSGYVW 307
                 K   R  +K  + E    F    L      +W    TL++L   LV SG +W
Sbjct: 297 SYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLW 354


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
 Frame = +2

Query: 2    LGIKDCFPLIEMITSKITNWKTRVLSYAGKLQLIISVLSSVHVYWSSSFMLPK------- 160
            L    C PLI+ IT++   W   +LSYAG+LQL+ ++L S+  YW   F LPK       
Sbjct: 769  LNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVE 828

Query: 161  SNCRKHSKHLFFECSFSRQVLW---KVSSGTWGLTQTLEMLIGSLVFSGYVWAIELKR 325
            + CRK       + S+   V W   +    T GL  T  +L         +WAI  K+
Sbjct: 829  TTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQ 886


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/47 (57%), Positives = 36/47 (76%)
 Frame = +2

Query: 17  CFPLIEMITSKITNWKTRVLSYAGKLQLIISVLSSVHVYWSSSFMLP 157
           C  L++ ITSK+ +W  R LSYAG++QLI SVL S+ VYW+S F+LP
Sbjct: 73  CKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLP 119