BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027366
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309782.1| GRAS family transcription factor [Populus tr...    69   5e-10
ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...    68   9e-10
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer...    67   2e-09
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]    67   2e-09
ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...    66   3e-09

>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222852685|gb|EEE90232.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +3

Query: 3   TPFLYSXXXXXXXKALLKRYRSGWSLQPAQGE-DAGLYLAWKEEPVVWASAWK 158
           +P  +S       KALLKRYR+GW+L   QG+ D+G+YL WKEEPVVWASAWK
Sbjct: 358 SPVGFSDDVVDDVKALLKRYRAGWALVLPQGDHDSGIYLTWKEEPVVWASAWK 410


>ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 443

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = +3

Query: 3   TPFLYSXXXXXXXKALLKRYRSGWSLQPAQGED--AGLYLAWKEEPVVWASAWK 158
           +P  +S       KALLKRY+SGWSL   QG++  +G+YL WKEEPVVWASAWK
Sbjct: 389 SPSGFSDDVVDDVKALLKRYQSGWSLVVTQGDEHISGIYLTWKEEPVVWASAWK 442


>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
           gi|296081342|emb|CBI17688.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
 Frame = +3

Query: 3   TPFLYSXXXXXXXKALLKRYRSGWSL-QPAQGED--AGLYLAWKEEPVVWASAWK 158
           +P  +S       KALLKRYRSGW+L  P QGE+   G+YL WK+EPVVWASAWK
Sbjct: 381 SPLGFSEDVVDDVKALLKRYRSGWALVPPQQGENHQLGIYLTWKDEPVVWASAWK 435


>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
 Frame = +3

Query: 3   TPFLYSXXXXXXXKALLKRYRSGWSL-QPAQGED--AGLYLAWKEEPVVWASAWK 158
           +P  +S       KALLKRYRSGW+L  P QGE+   G+YL WK+EPVVWASAWK
Sbjct: 381 SPLGFSEDVVDDVKALLKRYRSGWALVPPQQGENHQLGIYLTWKDEPVVWASAWK 435


>ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 437

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = +3

Query: 3   TPFLYSXXXXXXXKALLKRYRSGWSLQPAQGED--AGLYLAWKEEPVVWASAWK 158
           +P  +S       KALLKRY+ GWSL  +QG++  +G+YL WKEEPVVWASAWK
Sbjct: 383 SPSGFSDDVVDDVKALLKRYQPGWSLVVSQGDEHLSGIYLTWKEEPVVWASAWK 436