BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027365
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]   504   e-140
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer...   503   e-140
ref|XP_002327997.1| GRAS family transcription factor [Populus tr...   498   e-139
ref|XP_002309782.1| GRAS family transcription factor [Populus tr...   495   e-138
dbj|BAF91722.1| putative SHORT-ROOT protein [Ipomoea nil]             473   e-131

>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score =  504 bits (1297), Expect = e-140
 Identities = 255/363 (70%), Positives = 291/363 (80%), Gaps = 2/363 (0%)
 Frame = +1

Query: 40   QAMESQVNMHNNPNQPQXXXXXXXXXXXXXNPFEAKKWATKILHECAMAISRKDDSKINH 219
            Q+  +Q +M ++ NQPQ              P    KWA+ +L ECA AIS KD S+I+H
Sbjct: 20   QSNGTQPDMQSSNNQPQTSHTSTSRSSDSGEPCVTGKWASSLLKECARAISDKDSSRIHH 79

Query: 220  LLWMLNELASPYGDSDQKLASHFLQALFCKAFKSGNHCYKTLTSVAEKSHSFESSRKVIL 399
            LLWMLNELASPYGD DQKLAS+FLQALFCKA +SG+ CYKTL+SVAEKSHSF+S+RK+IL
Sbjct: 80   LLWMLNELASPYGDCDQKLASYFLQALFCKATESGHRCYKTLSSVAEKSHSFDSARKLIL 139

Query: 400  KFQEVSPWTTFGHVASNGAILEALEGQAKLHIVDISNTFCTQWPTLLEALATRNDETPHL 579
            KFQEVSPWTTFGHVASNGAILEALEG+ KLHI+DISNT CTQWPTLLEALATRNDETP L
Sbjct: 140  KFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPRL 199

Query: 580  KLTVVVTLGMARSIMKEIGQRMEKFARLMGVPFEFRVVIGSSRLGELSREELGVQDDEAV 759
            KLTVVVT  + RS+MKEIGQRMEKFARLMGVPFEF+V+ G + LGEL++E LGV+DDEAV
Sbjct: 200  KLTVVVTASLVRSVMKEIGQRMEKFARLMGVPFEFQVISGVNHLGELTKEGLGVRDDEAV 259

Query: 760  AVNCVGALRRVITEERDEVVRMLYALNPKVVTVVEEEADFTSSSDDFMKCFEECLRFYTY 939
            AVNC+GALRRV  EER  V++ L +L P+VVTVVEEEADF+SS +DF+KCFEECLRFYT 
Sbjct: 260  AVNCIGALRRVEVEERRRVIQTLQSLGPRVVTVVEEEADFSSSRNDFVKCFEECLRFYTL 319

Query: 940  YFEMLEESFVPTSNERLMLERECSRSIISVLAC--XXXXXXXXXXXXXXXTQWSEKLKVS 1113
            YFEMLEESFVPTSNERLMLERECSRSI+ VLAC                  QWSE LK  
Sbjct: 320  YFEMLEESFVPTSNERLMLERECSRSIVRVLACDDIEDDTGEDCERREKGIQWSEGLKEX 379

Query: 1114 FTP 1122
            F+P
Sbjct: 380  FSP 382


>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
            gi|296081342|emb|CBI17688.3| unnamed protein product
            [Vitis vinifera]
          Length = 436

 Score =  503 bits (1296), Expect = e-140
 Identities = 255/363 (70%), Positives = 291/363 (80%), Gaps = 2/363 (0%)
 Frame = +1

Query: 40   QAMESQVNMHNNPNQPQXXXXXXXXXXXXXNPFEAKKWATKILHECAMAISRKDDSKINH 219
            Q+  +Q +M ++ NQPQ              P    KWA+ +L ECA AIS KD S+I+H
Sbjct: 20   QSNGTQPDMQSSNNQPQTSHTSTSRSSDSGEPCVTGKWASSLLKECARAISDKDSSRIHH 79

Query: 220  LLWMLNELASPYGDSDQKLASHFLQALFCKAFKSGNHCYKTLTSVAEKSHSFESSRKVIL 399
            LLWMLNELASPYGD DQKLAS+FLQALFCKA +SG+ CYKTL+SVAEKSHSF+S+RK+IL
Sbjct: 80   LLWMLNELASPYGDCDQKLASYFLQALFCKATESGHRCYKTLSSVAEKSHSFDSARKLIL 139

Query: 400  KFQEVSPWTTFGHVASNGAILEALEGQAKLHIVDISNTFCTQWPTLLEALATRNDETPHL 579
            KFQEVSPWTTFGHVASNGAILEALEG+ KLHI+DISNT CTQWPTLLEALATRNDETP L
Sbjct: 140  KFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPRL 199

Query: 580  KLTVVVTLGMARSIMKEIGQRMEKFARLMGVPFEFRVVIGSSRLGELSREELGVQDDEAV 759
            KLTVVVT  + RS+MKEIGQRMEKFARLMGVPFEF+V+ G + LGEL++E LGV+DDEAV
Sbjct: 200  KLTVVVTASLVRSVMKEIGQRMEKFARLMGVPFEFQVISGVNHLGELTKEGLGVRDDEAV 259

Query: 760  AVNCVGALRRVITEERDEVVRMLYALNPKVVTVVEEEADFTSSSDDFMKCFEECLRFYTY 939
            AVNC+GALRRV  EER  V++ L +L P+VVTVVEEEADF+SS +DF+KCFEECLRFYT 
Sbjct: 260  AVNCIGALRRVEVEERRRVIQTLQSLGPRVVTVVEEEADFSSSRNDFVKCFEECLRFYTL 319

Query: 940  YFEMLEESFVPTSNERLMLERECSRSIISVLAC--XXXXXXXXXXXXXXXTQWSEKLKVS 1113
            YFEMLEESFVPTSNERLMLERECSRSI+ VLAC                  QWSE LK  
Sbjct: 320  YFEMLEESFVPTSNERLMLERECSRSIVRVLACDDIEDDTGEDCERREKGIQWSEGLKEV 379

Query: 1114 FTP 1122
            F+P
Sbjct: 380  FSP 382


>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222837406|gb|EEE75785.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 411

 Score =  498 bits (1283), Expect = e-139
 Identities = 246/353 (69%), Positives = 287/353 (81%), Gaps = 1/353 (0%)
 Frame = +1

Query: 67   HNNPNQPQXXXXXXXXXXXXXNPFEA-KKWATKILHECAMAISRKDDSKINHLLWMLNEL 243
            +NN NQPQ                    KWA+K+L ECA AIS KD SKI+HLLWMLNEL
Sbjct: 7    NNNNNQPQTSHTSTSRSSDSGEACGGGNKWASKLLSECARAISEKDSSKIHHLLWMLNEL 66

Query: 244  ASPYGDSDQKLASHFLQALFCKAFKSGNHCYKTLTSVAEKSHSFESSRKVILKFQEVSPW 423
            ASPYGD DQKLAS+FLQALFCKA +SG  C+KTLT+VAEKSHSF+S+RK+ILKFQEVSPW
Sbjct: 67   ASPYGDCDQKLASYFLQALFCKATESGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPW 126

Query: 424  TTFGHVASNGAILEALEGQAKLHIVDISNTFCTQWPTLLEALATRNDETPHLKLTVVVTL 603
            TTFGHVASNGAILEAL+G++KLHI+DISNT CTQWPTLLEALATRNDETP LKLTVVVT 
Sbjct: 127  TTFGHVASNGAILEALDGESKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTA 186

Query: 604  GMARSIMKEIGQRMEKFARLMGVPFEFRVVIGSSRLGELSREELGVQDDEAVAVNCVGAL 783
             + RS+MKEIGQRMEKFARLMGVPFEF+V+   + +GEL++E LGVQ+DEAVA+NC+GAL
Sbjct: 187  SIVRSVMKEIGQRMEKFARLMGVPFEFKVISVLNHIGELTKEGLGVQEDEAVAINCIGAL 246

Query: 784  RRVITEERDEVVRMLYALNPKVVTVVEEEADFTSSSDDFMKCFEECLRFYTYYFEMLEES 963
            RRV  +ER  V+++  +LNP+VVT+VEEEADFTSS  DF+KCFEECLR+YT YFEMLEES
Sbjct: 247  RRVEVDERSSVIQLFRSLNPRVVTIVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEES 306

Query: 964  FVPTSNERLMLERECSRSIISVLACXXXXXXXXXXXXXXXTQWSEKLKVSFTP 1122
            FVPTSNERLMLERECSR+I+ VLAC                QWSE+L+ +F+P
Sbjct: 307  FVPTSNERLMLERECSRNIVRVLACDEETGGGECERRERGVQWSERLREAFSP 359


>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222852685|gb|EEE90232.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 411

 Score =  495 bits (1275), Expect = e-138
 Identities = 246/353 (69%), Positives = 286/353 (81%), Gaps = 1/353 (0%)
 Frame = +1

Query: 67   HNNPNQPQXXXXXXXXXXXXXNPFEA-KKWATKILHECAMAISRKDDSKINHLLWMLNEL 243
            +NN NQPQ                 A  KWA+++L ECA AIS KD SKI++LLWMLNEL
Sbjct: 7    NNNNNQPQTSHTSTSRSSDSGEACGAGNKWASRLLSECARAISEKDSSKIHNLLWMLNEL 66

Query: 244  ASPYGDSDQKLASHFLQALFCKAFKSGNHCYKTLTSVAEKSHSFESSRKVILKFQEVSPW 423
            ASPYGD +QKLASHFLQALFCKA  SG  C+KTLT+VAEKSHSF+S+RK+ILKFQEVSPW
Sbjct: 67   ASPYGDCEQKLASHFLQALFCKATDSGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPW 126

Query: 424  TTFGHVASNGAILEALEGQAKLHIVDISNTFCTQWPTLLEALATRNDETPHLKLTVVVTL 603
            TTFGHVASNGAILEAL+G +KLHI+DIS+T CTQWPTLLEALATRNDETPHLKLTVVVT 
Sbjct: 127  TTFGHVASNGAILEALDGASKLHIIDISHTLCTQWPTLLEALATRNDETPHLKLTVVVTA 186

Query: 604  GMARSIMKEIGQRMEKFARLMGVPFEFRVVIGSSRLGELSREELGVQDDEAVAVNCVGAL 783
             + RS+MKEIGQRMEKFARLMGVPFE  V+ G + LGEL+++ LGVQ+DEAVA+NC GAL
Sbjct: 187  SIVRSVMKEIGQRMEKFARLMGVPFELNVISGLNHLGELTKDRLGVQEDEAVAINCNGAL 246

Query: 784  RRVITEERDEVVRMLYALNPKVVTVVEEEADFTSSSDDFMKCFEECLRFYTYYFEMLEES 963
            RRV  EER+ V++M  +LNP+VVT+VEEEADFTSS  DF+KCFEECLR+YT YFEMLEES
Sbjct: 247  RRVGVEERNSVIQMFQSLNPRVVTIVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEES 306

Query: 964  FVPTSNERLMLERECSRSIISVLACXXXXXXXXXXXXXXXTQWSEKLKVSFTP 1122
            FVPTSNERLMLERECSR+I+ VLAC               +QW E+L+ +F+P
Sbjct: 307  FVPTSNERLMLERECSRNIVRVLACDEGNDGGECERRERGSQWFERLREAFSP 359


>dbj|BAF91722.1| putative SHORT-ROOT protein [Ipomoea nil]
          Length = 412

 Score =  473 bits (1217), Expect = e-131
 Identities = 235/328 (71%), Positives = 269/328 (82%), Gaps = 2/328 (0%)
 Frame = +1

Query: 148  KWATKILHECAMAISRKDDSKINHLLWMLNELASPYGDSDQKLASHFLQALFCKAFKSGN 327
            KWA ++L ECA AIS KD +KI+ LLWMLNELASPYGD DQKLA+HFLQALFCKA ++G 
Sbjct: 26   KWAERLLRECAGAISEKDSAKIHQLLWMLNELASPYGDCDQKLAAHFLQALFCKATETGP 85

Query: 328  HCYKTLTSVAEKSHSFESSRKVILKFQEVSPWTTFGHVASNGAILEALEGQAKLHIVDIS 507
             CYKTL SV+EKSHSF+S+RK+ILKFQEVSPWTTFGHVASNGAILEAL+G+ KLHI+DIS
Sbjct: 86   KCYKTLLSVSEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDIS 145

Query: 508  NTFCTQWPTLLEALATRNDETPHLKLTVVVTLG-MARSIMKEIGQRMEKFARLMGVPFEF 684
            NTFCTQWPTLLEALATRNDETPHLKLTVVVT   + +S MKEI QRMEKFARLMGVPFEF
Sbjct: 146  NTFCTQWPTLLEALATRNDETPHLKLTVVVTAATVVKSFMKEIAQRMEKFARLMGVPFEF 205

Query: 685  RVVIGSSRLGELSREELGVQDDEAVAVNCVGALRRVITEERDEVVRMLYALNPKVVTVVE 864
             VV G + LGE++++ L V+DDE+VA+NC+GALRRV  EER E++R   +L PKVVTVVE
Sbjct: 206  NVVSGLTHLGEITKDVLNVRDDESVAINCIGALRRVAVEERGEILRTFRSLRPKVVTVVE 265

Query: 865  EEADFTSSSDDFMKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLACXX 1044
            E+ADFT + DDF+KCFEECLRFYT Y EML ESF  TSNERLMLERECSRSI+ VL C  
Sbjct: 266  EDADFTHNRDDFVKCFEECLRFYTLYLEMLAESFPATSNERLMLERECSRSILRVLGCDE 325

Query: 1045 XXXXXXXXXXXXXTQWSEKLK-VSFTPF 1125
                          QWSEKL+   F+PF
Sbjct: 326  QISDGDSENRERGIQWSEKLRDAGFSPF 353