BLASTX nr result

ID: Coptis23_contig00027349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027349
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280016.1| PREDICTED: disease resistance protein At4g27...    64   2e-08
ref|XP_002277748.2| PREDICTED: disease resistance protein RPS5-l...    62   5e-08
emb|CAN75117.1| hypothetical protein VITISV_002420 [Vitis vinifera]    62   5e-08
emb|CAN80410.1| hypothetical protein VITISV_018933 [Vitis vinifera]    62   6e-08
ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27...    60   2e-07

>ref|XP_002280016.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 976

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = -1

Query: 541  LSYIEVIGCPNLKKLPLVAQAVSHLKRIEGETKWFERLEWEDESLKSCFQPFF 383
            L+Y+EVIGC +LKKLPL  ++ + LK I GE +W+ RLEW+   ++S  QPFF
Sbjct: 918  LAYVEVIGCDSLKKLPLSKRSANALKEIVGELEWWNRLEWDRIDIQSKLQPFF 970


>ref|XP_002277748.2| PREDICTED: disease resistance protein RPS5-like [Vitis vinifera]
          Length = 883

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = -1

Query: 541 LSYIEVIGCPNLKKLPLVAQAVSH-LKRIEGETKWFERLEWEDESLKSCFQPFF 383
           L  I V  CPNL+KLPL + + S+ LK IEGE+ W+E L+WED++LK  F P+F
Sbjct: 827 LKKIHVYHCPNLRKLPLNSNSASNTLKIIEGESSWWENLQWEDDNLKRTFTPYF 880


>emb|CAN75117.1| hypothetical protein VITISV_002420 [Vitis vinifera]
          Length = 1377

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = -1

Query: 541  LSYIEVIGCPNLKKLPLVAQAVSH-LKRIEGETKWFERLEWEDESLKSCFQPFF 383
            L  I VI CPNL+KLPL + + ++ LK IEG   W+E LEWED++LK  F P+F
Sbjct: 1320 LKKIHVIRCPNLRKLPLNSNSATNTLKEIEGHLTWWEELEWEDDNLKRIFTPYF 1373



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
 Frame = -1

Query: 556  PISCP-LSYIEVIGCPNLKKLPLVAQAVSH-LKRIEGETKWFERLEWEDESLKSCFQPFF 383
            P+  P L  I V+ CPNL+KLPL + + ++ LK I GE+ W+E LEWED++LK  F P+F
Sbjct: 823  PLPFPSLKEIRVLHCPNLRKLPLNSNSATNTLKAIVGESSWWEELEWEDDNLKRIFIPYF 882


>emb|CAN80410.1| hypothetical protein VITISV_018933 [Vitis vinifera]
          Length = 881

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = -1

Query: 541 LSYIEVIGCPNLKKLPLVAQAVSH-LKRIEGETKWFERLEWEDESLKSCFQPFF 383
           L  I V  CPNL+KLPL + + S+ LK IEGE+ W+E L+WED++LK  F P+F
Sbjct: 825 LKKIHVYHCPNLRKLPLNSNSASNTLKIIEGESSWWENLKWEDDNLKRTFTPYF 878


>ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 982

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -1

Query: 532  IEVIGCPNLKKLPLVAQAVSHLKRIEGETKWFERLEWEDESLKSCFQPFFVATEAGE 362
            + V  C +LK+LPL  Q+V+ +K+I GE +W+ RLEW DE ++S  QPFF+    G+
Sbjct: 922  LTVNDCDHLKRLPLNRQSVNIIKKIRGELEWWRRLEWGDEEMRSSLQPFFLECTFGK 978


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