BLASTX nr result

ID: Coptis23_contig00027339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027339
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320784.1| predicted protein [Populus trichocarpa] gi|2...   179   9e-43
ref|XP_002267609.1| PREDICTED: remorin [Vitis vinifera] gi|14784...   179   1e-42
gb|AGB07445.1| remorin [Morus indica]                                 178   3e-42
ref|XP_002510796.1| Remorin, putative [Ricinus communis] gi|2235...   178   3e-42
ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|2235...   174   3e-41

>ref|XP_002320784.1| predicted protein [Populus trichocarpa] gi|222861557|gb|EEE99099.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  179 bits (455), Expect = 9e-43
 Identities = 101/183 (55%), Positives = 132/183 (72%), Gaps = 8/183 (4%)
 Frame = +3

Query: 441 TLTPLTPASIETVKDVMQEKSVVGH---AEEK---VDDPKALAVVEKVPDTEEKSSGGSF 602
           T TP+TPA +ET  DV  EK++V     AEEK    D+ KALAVVEK     +K SGGS 
Sbjct: 11  TETPVTPAPVETKSDVADEKAIVPPPPAAEEKEKVADELKALAVVEKTEPAPKKISGGSI 70

Query: 603 NGD--LRRVETEKRLSLIRAWEDSEKTKAENKAQRTLAAIKLREDTKIADVEAQMKQIEV 776
           + D  L  +E EKRLS I+AWEDSEKTKAENK+Q+ L+A+   E++K A +EA ++++E 
Sbjct: 71  DRDIALADLEKEKRLSFIKAWEDSEKTKAENKSQKKLSAVVAWENSKKAALEATLRKMEE 130

Query: 777 KLEKQKADAAEELKKKIALISKDTEGRRAMVASLRGKDFFEAEQRAAEYRAKNTVPKKLL 956
           KLEKQKA+ AE++K K+ALI KD E +RAMV + RG++F +AE+ AA+YRA    PKKLL
Sbjct: 131 KLEKQKAEYAEKMKNKVALIHKDAEEQRAMVEAKRGEEFLKAEEMAAKYRATGQTPKKLL 190

Query: 957 GCF 965
           GCF
Sbjct: 191 GCF 193


>ref|XP_002267609.1| PREDICTED: remorin [Vitis vinifera] gi|147840877|emb|CAN73187.1|
           hypothetical protein VITISV_041529 [Vitis vinifera]
           gi|302143892|emb|CBI22753.3| unnamed protein product
           [Vitis vinifera]
          Length = 196

 Score =  179 bits (454), Expect = 1e-42
 Identities = 102/196 (52%), Positives = 137/196 (69%), Gaps = 14/196 (7%)
 Frame = +3

Query: 420 MTSSEPATLT-------PLTPASIETVKDVMQEKSVVGHA---EEKVDDPKALAVVEKVP 569
           M++ EP T+        P  P   E  KDV +EK+V+  A   EEK D+ KALA+VEKVP
Sbjct: 1   MSAEEPKTVAESETPTDPPPPEPTEAPKDVTEEKAVIPPAPPPEEKPDETKALAIVEKVP 60

Query: 570 DT--EEKSSGGSFNGD--LRRVETEKRLSLIRAWEDSEKTKAENKAQRTLAAIKLREDTK 737
           +   E+ S GGS N D  L RV TEKRLSLIRAWE+SEK KAENKAQ+ L+A +  E+++
Sbjct: 61  EPIEEKGSEGGSVNRDTVLARVATEKRLSLIRAWEESEKCKAENKAQKKLSATEAWENSQ 120

Query: 738 IADVEAQMKQIEVKLEKQKADAAEELKKKIALISKDTEGRRAMVASLRGKDFFEAEQRAA 917
            A VEA++K+IE  LE++KA+  E++K KIA+I K+ E +RAM+ + RG+D  +AE+ AA
Sbjct: 121 KASVEAELKKIEENLERKKAEYVEKMKNKIAIIHKEAEEKRAMIEARRGEDLLKAEEMAA 180

Query: 918 EYRAKNTVPKKLLGCF 965
           +YRA  + PKKLLGCF
Sbjct: 181 KYRATGSAPKKLLGCF 196


>gb|AGB07445.1| remorin [Morus indica]
          Length = 199

 Score =  178 bits (451), Expect = 3e-42
 Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 6/192 (3%)
 Frame = +3

Query: 408 LDTEMTSSEPATLTPLTPASIETVKDVMQEKSVVGHA--EEKVDDPKALAVVEKVPD--T 575
           ++ E  SSEP T   + PA  E  KDV +EKSV+ H   E+K D+ KALAVV+  P+   
Sbjct: 9   VEPEAPSSEPPTEAKVKPAE-EPPKDVTEEKSVIPHPPPEDKPDESKALAVVDMEPEPAA 67

Query: 576 EEKSSGGSFNGD--LRRVETEKRLSLIRAWEDSEKTKAENKAQRTLAAIKLREDTKIADV 749
           E+ SS GS N D  L RV TEKRLSLIRAWE+SEK+KAENKA + +++I   E++K A V
Sbjct: 68  EKSSSEGSINRDAVLARVATEKRLSLIRAWEESEKSKAENKAHKNVSSIGAWENSKKASV 127

Query: 750 EAQMKQIEVKLEKQKADAAEELKKKIALISKDTEGRRAMVASLRGKDFFEAEQRAAEYRA 929
           EAQ+K+ E  LEK+KA+  E++K KIALI K+ E R+A++ + RG++  +AE+ AA+YRA
Sbjct: 128 EAQLKKFEENLEKKKAEYVEKMKNKIALIHKEAEERKAIIEAKRGEELLKAEESAAKYRA 187

Query: 930 KNTVPKKLLGCF 965
             T PKKLLGCF
Sbjct: 188 TGTGPKKLLGCF 199


>ref|XP_002510796.1| Remorin, putative [Ricinus communis] gi|223549911|gb|EEF51398.1|
           Remorin, putative [Ricinus communis]
          Length = 182

 Score =  178 bits (451), Expect = 3e-42
 Identities = 103/186 (55%), Positives = 130/186 (69%), Gaps = 4/186 (2%)
 Frame = +3

Query: 420 MTSSEPATLTPLTPASIETVKDVMQEKSVVGHA--EEKVDDPKALAVVEKVPDTEEKSSG 593
           M   EP  L P  P+  E  KDV +EKS +     E+  DD KAL  VEK    EEKS+ 
Sbjct: 1   MAEEEPKKLEPEAPS--EPPKDVAEEKSAIPPPPQEKASDDSKALVAVEK--SVEEKSTE 56

Query: 594 GSFNGD--LRRVETEKRLSLIRAWEDSEKTKAENKAQRTLAAIKLREDTKIADVEAQMKQ 767
           GS N D  L RVETEKR+SLIRAWE+SEK+KAENKA + L+AI   E++K A VEA++KQ
Sbjct: 57  GSVNRDAVLARVETEKRVSLIRAWEESEKSKAENKAHKKLSAIVSWENSKKASVEAELKQ 116

Query: 768 IEVKLEKQKADAAEELKKKIALISKDTEGRRAMVASLRGKDFFEAEQRAAEYRAKNTVPK 947
           +E KLEK+KA+  E++K KIALI K+ E +RAM+ + RG+D  +AE+ AA+YRA  T PK
Sbjct: 117 MEEKLEKKKAEYVEKMKNKIALIHKEAEEKRAMIEAKRGEDLLKAEETAAKYRATGTAPK 176

Query: 948 KLLGCF 965
           KLLGCF
Sbjct: 177 KLLGCF 182


>ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|223549013|gb|EEF50502.1|
           Remorin, putative [Ricinus communis]
          Length = 188

 Score =  174 bits (442), Expect = 3e-41
 Identities = 93/176 (52%), Positives = 129/176 (73%), Gaps = 3/176 (1%)
 Frame = +3

Query: 447 TPLTPASIETVKDVMQEKSVVGHAEEKVDDPKALAVVEKVPDT-EEKSSGGSFNGD--LR 617
           +P+ PA  E   DV  +K+ V   EEK DD KALAVVEKVP++  +K+SGGS + D  L 
Sbjct: 13  SPVAPAPAEAKSDVAHDKATVPTPEEKPDDSKALAVVEKVPESGPKKTSGGSLDRDIALA 72

Query: 618 RVETEKRLSLIRAWEDSEKTKAENKAQRTLAAIKLREDTKIADVEAQMKQIEVKLEKQKA 797
            VE EKR S I+AWEDSEK+KAENKAQ+ L+++   E++K A +EA++++IE +LEK+KA
Sbjct: 73  EVEKEKRNSFIKAWEDSEKSKAENKAQKKLSSVTAWENSKKAALEAKLRKIEEQLEKKKA 132

Query: 798 DAAEELKKKIALISKDTEGRRAMVASLRGKDFFEAEQRAAEYRAKNTVPKKLLGCF 965
           + AE++K K+AL+ K  E +RAMV + RG++  +AE+ AA+YRA    PKKLLGCF
Sbjct: 133 EYAEKMKNKVALVHKQAEEKRAMVEAQRGEEVLKAEEMAAKYRATGQTPKKLLGCF 188


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