BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027334
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20165.3| unnamed protein product [Vitis vinifera]              195   3e-48
ref|XP_002283388.1| PREDICTED: uncharacterized protein LOC100257...   195   3e-48
gb|AFW59605.1| chloroplast DNA polymerase [Zea mays]                  195   4e-48
dbj|BAB01162.1| unnamed protein product [Arabidopsis thaliana]        193   1e-47
ref|NP_001189942.1| polymerase gamma 1 [Arabidopsis thaliana] gi...   193   1e-47

>emb|CBI20165.3| unnamed protein product [Vitis vinifera]
          Length = 1118

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/112 (83%), Positives = 104/112 (92%)
 Frame = +1

Query: 1    EKKDVSSYGTAYEAFGGDKDGKEACHAIAALCDVCSIHSLISNFILPLQNNRISGKNGRI 180
            E  D+S+YGTAY AFG  ++G++ACHAIAALC+VCSI+SLISNFILPLQ+  ISGKNGRI
Sbjct: 757  EDTDISAYGTAYAAFGEGQEGRKACHAIAALCEVCSINSLISNFILPLQDGEISGKNGRI 816

Query: 181  HCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGCSLVVADYGQ 336
            HCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPG SL+VADYGQ
Sbjct: 817  HCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQ 868


>ref|XP_002283388.1| PREDICTED: uncharacterized protein LOC100257153 [Vitis vinifera]
          Length = 1034

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/112 (83%), Positives = 104/112 (92%)
 Frame = +1

Query: 1    EKKDVSSYGTAYEAFGGDKDGKEACHAIAALCDVCSIHSLISNFILPLQNNRISGKNGRI 180
            E  D+S+YGTAY AFG  ++G++ACHAIAALC+VCSI+SLISNFILPLQ+  ISGKNGRI
Sbjct: 673  EDTDISAYGTAYAAFGEGQEGRKACHAIAALCEVCSINSLISNFILPLQDGEISGKNGRI 732

Query: 181  HCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGCSLVVADYGQ 336
            HCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPG SL+VADYGQ
Sbjct: 733  HCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQ 784


>gb|AFW59605.1| chloroplast DNA polymerase [Zea mays]
          Length = 1033

 Score =  195 bits (495), Expect = 4e-48
 Identities = 93/110 (84%), Positives = 102/110 (92%)
 Frame = +1

Query: 7    KDVSSYGTAYEAFGGDKDGKEACHAIAALCDVCSIHSLISNFILPLQNNRISGKNGRIHC 186
            +D SSYGTAY+AFGG K+GKEACHAIAALC++CSI+SLISNFILPLQ N IS K GRIHC
Sbjct: 674  EDTSSYGTAYDAFGGGKEGKEACHAIAALCEICSINSLISNFILPLQGNHISCKEGRIHC 733

Query: 187  SLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGCSLVVADYGQ 336
            SLNINTETGRLSAR PNLQNQPALEKDRYKIRQAF+AAPG +L+VADYGQ
Sbjct: 734  SLNINTETGRLSARAPNLQNQPALEKDRYKIRQAFVAAPGNTLIVADYGQ 783


>dbj|BAB01162.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1088

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +1

Query: 4   KKDVSSYGTAYEAFGGDKDGKEACHAIAALCDVCSIHSLISNFILPLQNNRISGKNGRIH 183
           + D S+YGTA++AFGG + GKEACHAIAALC+VCSI SLISNFILPLQ + +SGK+GR+H
Sbjct: 641 ESDTSAYGTAFDAFGGGESGKEACHAIAALCEVCSIDSLISNFILPLQGSNVSGKDGRVH 700

Query: 184 CSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGCSLVVADYGQ 336
           CSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIA+PG SL+VADYGQ
Sbjct: 701 CSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIASPGNSLIVADYGQ 751


>ref|NP_001189942.1| polymerase gamma 1 [Arabidopsis thaliana] gi|332642872|gb|AEE76393.1|
            polymerase gamma 1 [Arabidopsis thaliana]
          Length = 1049

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +1

Query: 4    KKDVSSYGTAYEAFGGDKDGKEACHAIAALCDVCSIHSLISNFILPLQNNRISGKNGRIH 183
            + D S+YGTA++AFGG + GKEACHAIAALC+VCSI SLISNFILPLQ + +SGK+GR+H
Sbjct: 691  ESDTSAYGTAFDAFGGGESGKEACHAIAALCEVCSIDSLISNFILPLQGSNVSGKDGRVH 750

Query: 184  CSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGCSLVVADYGQ 336
            CSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIA+PG SL+VADYGQ
Sbjct: 751  CSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIASPGNSLIVADYGQ 801