BLASTX nr result

ID: Coptis23_contig00027333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027333
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329124.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-10

>ref|XP_002329124.1| predicted protein [Populus trichocarpa] gi|222869793|gb|EEF06924.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 65/234 (27%), Positives = 90/234 (38%), Gaps = 13/234 (5%)
 Frame = -1

Query: 769 SSIESFSFALPVAPSQV-QHSDFEFGSSTLKIPINDPNKDTPADVLFHNGRLLPHAYQCP 593
           +S   + F+ P  P  + Q SDFEFG  T   P  DPNK++PAD LF NGRLLPH++   
Sbjct: 9   TSSREYIFSFPSTPGTLDQDSDFEFGCLTPDSPSCDPNKNSPADHLFFNGRLLPHSFPVL 68

Query: 592 SQKEXXXXXXXXXXXXXXXXXXXSAGTXXXXXXXXXXXXXXXSYNGTRKGSVPYMDKKTS 413
            +++                      T                 N T          +TS
Sbjct: 69  RKQQ---------PTTMLLIDNIYRATSRASSVSCKDSLMSSRSNSTNSSRSSVSSARTS 119

Query: 412 NPD----------IVATRT--AIRRVKNEHFELHXXXXXXXXXXXXXSKAELSFRQSNTK 269
           + D          I +T+T  A + V  + +                 K E S R+S   
Sbjct: 120 SSDNSERRRLYNNITSTKTPLASKVVMAQLYGSSQRWQHIMPVPTAVLKREDSRRKSGGI 179

Query: 268 AAFAPQESNMNKQVKQSSENSWFGLKIFESFTSACRECHALEPSVEQGAIRENV 107
                  SN  +  K   E S    + F SF  ACRECHA+EPS     ++EN+
Sbjct: 180 LVKEGLISNKKQVKKGKRERSGLWRRFFMSFLVACRECHAMEPSTRDDMLQENI 233


>ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|222860550|gb|EEE98097.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 60/220 (27%), Positives = 87/220 (39%), Gaps = 6/220 (2%)
 Frame = -1

Query: 748 FALPVAPSQV-QHSDFEFGSSTLKIPINDPNKDTPADVLFHNGRLLPHAYQCPSQKEXXX 572
           F+ P  PS + Q SDFEFG  T   P  DPNK +PAD LF NGRLLPH++    Q+    
Sbjct: 32  FSFPSTPSTLDQDSDFEFGCLTPDSPSRDPNKSSPADHLFFNGRLLPHSFPVLQQQPATM 91

Query: 571 XXXXXXXXXXXXXXXXSAGTXXXXXXXXXXXXXXXSYNGTRKGSVPYMDKK-----TSNP 407
                           S+                 S +  R  S    +++     TS+ 
Sbjct: 92  LFIDNIYRAPSRASSVSSKDSLMSSRSNSTNSSRSSVSSARTSSSDNSERRRLYNITSSQ 151

Query: 406 DIVATRTAIRRVKNEHFELHXXXXXXXXXXXXXSKAELSFRQSNTKAAFAPQESNMNKQV 227
             +A++  I ++    +                 K   S R+S          +N  +  
Sbjct: 152 TPLASKAVIAQL----YGSSQRWQHIMPVPAAALKRADSRRKSGRILVKEGLSNNKKQIK 207

Query: 226 KQSSENSWFGLKIFESFTSACRECHALEPSVEQGAIRENV 107
           K   + S F  + F SF  ACRECHA+EPS +   +  N+
Sbjct: 208 KGKRDRSGFWRRFFRSFLLACRECHAMEPSTKDDILDGNI 247


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