BLASTX nr result

ID: Coptis23_contig00027326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027326
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16216.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002532810.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_003543491.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    63   3e-08
ref|XP_003606565.1| Zinc finger protein CONSTANS-like protein [M...    60   2e-07

>emb|CBI16216.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/56 (69%), Positives = 44/56 (78%)
 Frame = -2

Query: 385 KTLADSRPRIRGRFARNDEMGENSQGQWNQLEREETEEDDDIWLNLFDAFSVNLIP 218
           KTLADSRPRIRGRFARN+E+ + SQ QW+ L  EE EEDDD W N  DAFS NL+P
Sbjct: 196 KTLADSRPRIRGRFARNEEIEKGSQSQWSNLGGEECEEDDDNWTNFLDAFSANLVP 251


>ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|222872731|gb|EEF09862.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = -2

Query: 385 KTLADSRPRIRGRFARNDEMGENSQGQWNQLEREETEEDDDIWLNLFDAFSVNLIP 218
           K LADSRPRIRGRFARNDE+ +N Q QW+ +  EE EEDDD W++  D+FS N +P
Sbjct: 172 KILADSRPRIRGRFARNDEIEKNPQLQWSNVSGEEDEEDDDNWIDFLDSFSENSVP 227


>ref|XP_002532810.1| conserved hypothetical protein [Ricinus communis]
           gi|223527430|gb|EEF29567.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -2

Query: 385 KTLADSRPRIRGRFARNDEMGENSQGQW-NQLEREETEEDDDIWLNLFDAFSVNLIP 218
           KTLADSRPRIRGRFARNDE+ +  Q QW N +  EE E+ DD W++  DAFS N IP
Sbjct: 84  KTLADSRPRIRGRFARNDEIEKIPQSQWCNNISGEEDEDYDDNWIDFLDAFSANSIP 140


>ref|XP_003543491.1| PREDICTED: zinc finger protein CONSTANS-LIKE 1-like [Glycine max]
          Length = 112

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
 Frame = -2

Query: 385 KTLADSRPRIRGRFARNDEMGENSQGQWNQL-EREETEEDDDIWLNLFDA 239
           KTLADSRPRIRGRFARNDE+ +N+  QW+Q+   E+ +E+D+ W+ + D+
Sbjct: 43  KTLADSRPRIRGRFARNDEIDKNTTIQWSQIGAGEDEDEEDENWITMLDS 92


>ref|XP_003606565.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|355507620|gb|AES88762.1| Zinc finger protein
           CONSTANS-like protein [Medicago truncatula]
          Length = 242

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
 Frame = -2

Query: 385 KTLADSRPRIRGRFARNDEMGENSQGQWNQLEREE--TEEDDDIWLNLFDAF--SVNLIP 218
           KTLADSRPRIRGRFA+NDE+  N   QW+ +   E   +E+++ W +LFD+   + NL P
Sbjct: 171 KTLADSRPRIRGRFAKNDEIVRNPPNQWSHISNGEELEDEEEENWDSLFDSLVPTSNLAP 230

Query: 217 HQ 212
            +
Sbjct: 231 EE 232


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