BLASTX nr result

ID: Coptis23_contig00027317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027317
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vit...   143   2e-32
ref|XP_002280388.2| PREDICTED: MATE efflux family protein DTX1-l...   143   2e-32
emb|CBI15521.3| unnamed protein product [Vitis vinifera]              143   2e-32
emb|CBI15520.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isof...   143   2e-32

>ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vitis vinifera]
          Length = 399

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   DISAEAGLYARYMIPSLFAYGLLQCHVRFLQTQNIVIPMMISSGLTTLLHILVCWILVFK 181
           +IS EA LYAR+MIPSLFAYGLLQC VRFLQTQNIV PMM+SSG+TTLLH+LVCW LVFK
Sbjct: 60  EISQEAELYARFMIPSLFAYGLLQCLVRFLQTQNIVFPMMLSSGITTLLHVLVCWFLVFK 119

Query: 182 SGLGSRGAALANSISYWINVALL 250
           SGLGS+GAALANSIS WINV LL
Sbjct: 120 SGLGSKGAALANSISCWINVLLL 142


>ref|XP_002280388.2| PREDICTED: MATE efflux family protein DTX1-like [Vitis vinifera]
          Length = 491

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   DISAEAGLYARYMIPSLFAYGLLQCHVRFLQTQNIVIPMMISSGLTTLLHILVCWILVFK 181
           +IS EA LYAR+MIPSLFAYGLLQC VRFLQTQNIV PMM+SSG+TTLLH+LVCW LVFK
Sbjct: 154 EISQEAELYARFMIPSLFAYGLLQCLVRFLQTQNIVFPMMLSSGITTLLHVLVCWFLVFK 213

Query: 182 SGLGSRGAALANSISYWINVALL 250
           SGLGS+GAALANSIS WINV LL
Sbjct: 214 SGLGSKGAALANSISCWINVLLL 236


>emb|CBI15521.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   DISAEAGLYARYMIPSLFAYGLLQCHVRFLQTQNIVIPMMISSGLTTLLHILVCWILVFK 181
           +IS EA LYAR+MIPSLFAYGLLQC VRFLQTQNIV PMM+SSG+TTLLH+LVCW LVFK
Sbjct: 224 EISQEAELYARFMIPSLFAYGLLQCLVRFLQTQNIVFPMMLSSGITTLLHVLVCWFLVFK 283

Query: 182 SGLGSRGAALANSISYWINVALL 250
           SGLGS+GAALANSIS WINV LL
Sbjct: 284 SGLGSKGAALANSISCWINVLLL 306


>emb|CBI15520.3| unnamed protein product [Vitis vinifera]
          Length = 1072

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   DISAEAGLYARYMIPSLFAYGLLQCHVRFLQTQNIVIPMMISSGLTTLLHILVCWILVFK 181
           +IS EA LYAR+MIPSLFAYGLLQC VRFLQTQNIV PMM+SSG+TTLLH+LVCW LVFK
Sbjct: 735 EISQEAELYARFMIPSLFAYGLLQCLVRFLQTQNIVFPMMLSSGITTLLHVLVCWFLVFK 794

Query: 182 SGLGSRGAALANSISYWINVALL 250
           SGLGS+GAALANSIS WINV LL
Sbjct: 795 SGLGSKGAALANSISCWINVLLL 817



 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/82 (64%), Positives = 62/82 (75%)
 Frame = +2

Query: 5   ISAEAGLYARYMIPSLFAYGLLQCHVRFLQTQNIVIPMMISSGLTTLLHILVCWILVFKS 184
           IS  AG Y  +M+P+LF+ G+LQC VRFLQTQ IV P+M+ S +TTL H   CWILVFK+
Sbjct: 146 ISRGAGRYVWFMMPTLFSCGILQCLVRFLQTQKIVFPVMLISAITTLFHFPTCWILVFKT 205

Query: 185 GLGSRGAALANSISYWINVALL 250
            LGS GAALA SIS WINV LL
Sbjct: 206 SLGSAGAALACSISSWINVFLL 227


>ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isoform 2 [Vitis vinifera]
          Length = 493

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   DISAEAGLYARYMIPSLFAYGLLQCHVRFLQTQNIVIPMMISSGLTTLLHILVCWILVFK 181
           +IS EA LYAR+MIPSLFAYGLLQC VRFLQTQNIV PMM+SSG+TTLLH+LVCW LVFK
Sbjct: 154 EISQEAELYARFMIPSLFAYGLLQCLVRFLQTQNIVFPMMLSSGITTLLHVLVCWFLVFK 213

Query: 182 SGLGSRGAALANSISYWINVALL 250
           SGLGS+GAALANSIS WINV LL
Sbjct: 214 SGLGSKGAALANSISCWINVLLL 236


Top