BLASTX nr result

ID: Coptis23_contig00027310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027310
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522935.1| conserved hypothetical protein [Ricinus comm...   118   6e-25
emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]   117   8e-25
emb|CBI18334.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CBI18323.3| unnamed protein product [Vitis vinifera]              117   1e-24
gb|ABI15899.1| marker Xucw84 [Triticum dicoccoides]                   104   9e-21

>ref|XP_002522935.1| conserved hypothetical protein [Ricinus communis]
           gi|223537829|gb|EEF39446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 636

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/85 (64%), Positives = 68/85 (80%)
 Frame = -1

Query: 285 LKIFFPRLHKLKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISANE 106
           L++FFPRL KLKS+P+SGTGKHKYSFRRVEVPSLP+HFCDCEEH G+    K KQI   E
Sbjct: 141 LRLFFPRLQKLKSIPFSGTGKHKYSFRRVEVPSLPLHFCDCEEHSGSLHAPKGKQIPVLE 200

Query: 105 EQTEIMKEEELNMMRSVMDKIFNRE 31
           EQ   + +EEL++M SVM+++F  E
Sbjct: 201 EQGGGVNQEELDLMISVMNRLFEIE 225


>emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]
          Length = 654

 Score =  117 bits (294), Expect = 8e-25
 Identities = 54/85 (63%), Positives = 67/85 (78%)
 Frame = -1

Query: 285 LKIFFPRLHKLKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISANE 106
           L+IFFP+L K+KS+P+SGTGKHKYSF+R+EVPSLP HFCDCEEH G   IA+ +     E
Sbjct: 138 LRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHIAQKQYFCDPE 197

Query: 105 EQTEIMKEEELNMMRSVMDKIFNRE 31
            Q+  M ++ELNMM SVM+KIF RE
Sbjct: 198 PQSGGMNKDELNMMNSVMNKIFERE 222


>emb|CBI18334.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/93 (59%), Positives = 69/93 (74%)
 Frame = -1

Query: 285 LKIFFPRLHKLKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISANE 106
           L+IFFP+L K+KS+P+SGTGKHKYSF+R+EVPSLP HFCDCEEH G   IA+ +     E
Sbjct: 308 LRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHIAQKQYFCDPE 367

Query: 105 EQTEIMKEEELNMMRSVMDKIFNREVKPSSEGR 7
            Q+  M ++ELN+M SVM+KIF RE     E R
Sbjct: 368 SQSGGMNKDELNVMNSVMNKIFERETDLKDELR 400


>emb|CBI18323.3| unnamed protein product [Vitis vinifera]
          Length = 218

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/85 (63%), Positives = 66/85 (77%)
 Frame = -1

Query: 285 LKIFFPRLHKLKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISANE 106
           L+IFFP+L K+KS+P+SGTGKHKYSF+R+EVPSLP HFCDCEEH G    A+ +     E
Sbjct: 109 LRIFFPKLKKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHTAQKQYFCDRE 168

Query: 105 EQTEIMKEEELNMMRSVMDKIFNRE 31
            Q+  M +EELNMM SVM+KIF RE
Sbjct: 169 PQSGGMNKEELNMMNSVMNKIFERE 193


>gb|ABI15899.1| marker Xucw84 [Triticum dicoccoides]
          Length = 614

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
 Frame = -1

Query: 285 LKIFFPRLHKLKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISANE 106
           L I+FPRL KLK +P+ G+GKHKYSFR +EVPS PIHFCDCEEHCG  E        ANE
Sbjct: 146 LNIYFPRLRKLKPLPFKGSGKHKYSFRNIEVPSYPIHFCDCEEHCGPPE-------KANE 198

Query: 105 EQTEIMK----EEELNMMRSVMDKIFNREVK 25
           E   ++     E+E N+M SVM K+F ++ +
Sbjct: 199 EYAAVLNRVAYEKERNIMNSVMSKLFEKDTE 229


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