BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027299
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   140   2e-31
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              140   2e-31
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   137   2e-30
ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata s...   132   5e-29
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...   132   6e-29

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  140 bits (353), Expect = 2e-31
 Identities = 66/90 (73%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
 Frame = +3

Query: 405 SRLHFIGTWRNRYRKHFP--SWGFKHENPTVDASNVDQGTSVIHIDMDCFFVSVILRNRP 578
           SRLHFIGTWRNRY+K FP  S  FKH +  ++AS V Q   +IH+DMDCFFVSV++RN P
Sbjct: 356 SRLHFIGTWRNRYQKRFPRLSNEFKHTSSDLNASGVSQKNVIIHMDMDCFFVSVVIRNNP 415

Query: 579 ELQDKPVAVCHSDNPRGTAEISSANYPARD 668
           ELQDKPVAVCHS+NP+GTAEISSANYPARD
Sbjct: 416 ELQDKPVAVCHSNNPKGTAEISSANYPARD 445


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  140 bits (353), Expect = 2e-31
 Identities = 66/90 (73%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
 Frame = +3

Query: 405 SRLHFIGTWRNRYRKHFP--SWGFKHENPTVDASNVDQGTSVIHIDMDCFFVSVILRNRP 578
           SRLHFIGTWRNRY+K FP  S  FKH +  ++AS V Q   +IH+DMDCFFVSV++RN P
Sbjct: 334 SRLHFIGTWRNRYQKRFPRLSNEFKHTSSDLNASGVSQKNVIIHMDMDCFFVSVVIRNNP 393

Query: 579 ELQDKPVAVCHSDNPRGTAEISSANYPARD 668
           ELQDKPVAVCHS+NP+GTAEISSANYPARD
Sbjct: 394 ELQDKPVAVCHSNNPKGTAEISSANYPARD 423


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = +3

Query: 402 NSRLHFIGTWRNRYRKHFP--SWGFKHENPTVDASNVDQGTSVIHIDMDCFFVSVILRNR 575
           +SRLHFIGTWRNRYRK FP  S  F+  + T+DAS+    T ++H+DMDCFFVSV++RN 
Sbjct: 324 SSRLHFIGTWRNRYRKRFPRLSSDFRCRSLTIDASDNSHKTVIMHVDMDCFFVSVVIRNH 383

Query: 576 PELQDKPVAVCHSDNPRGTAEISSANYPAR 665
           PEL DKPVAVCHSDNP+GTAEISSANYPAR
Sbjct: 384 PELHDKPVAVCHSDNPKGTAEISSANYPAR 413


>ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata subsp. lyrata]
           gi|297311162|gb|EFH41586.1| polymerase ATREV1-1105
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1105

 Score =  132 bits (333), Expect = 5e-29
 Identities = 62/90 (68%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = +3

Query: 402 NSRLHFIGTWRNRYRKHF--PSWGFKHENPTVDASNVDQGTSVIHIDMDCFFVSVILRNR 575
           NSRLHFIGTWRNRYRK F  PS G K  +   + + +D+ +++IHID+DCFFVSV+++NR
Sbjct: 333 NSRLHFIGTWRNRYRKRFHGPSNGLKWADSGQNTAEMDKKSTIIHIDLDCFFVSVVIKNR 392

Query: 576 PELQDKPVAVCHSDNPRGTAEISSANYPAR 665
            EL DKPVAVCHSDNP+GTAEISSANYPAR
Sbjct: 393 LELHDKPVAVCHSDNPKGTAEISSANYPAR 422


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
           predicted protein [Populus trichocarpa]
          Length = 1191

 Score =  132 bits (332), Expect = 6e-29
 Identities = 61/91 (67%), Positives = 75/91 (82%), Gaps = 2/91 (2%)
 Frame = +3

Query: 402 NSRLHFIGTWRNRYRKHFPSWG--FKHENPTVDASNVDQGTSVIHIDMDCFFVSVILRNR 575
           +SRLHFIGTWR+RYRK FPS    FK  +  ++ S+    +++IH+DMDCFFVSV++RN 
Sbjct: 399 SSRLHFIGTWRSRYRKRFPSSSSEFKCRSSDLNTSDNSNKSTIIHVDMDCFFVSVVIRNH 458

Query: 576 PELQDKPVAVCHSDNPRGTAEISSANYPARD 668
           PEL DKPVAVCHSDNP+GTAEISSANYPAR+
Sbjct: 459 PELHDKPVAVCHSDNPKGTAEISSANYPARN 489