BLASTX nr result

ID: Coptis23_contig00027289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027289
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74605.1| ATP synthase beta subunit [Krapfia ranunculina]        326   3e-87
gb|ABW74590.1| ATP synthase beta subunit [Anemone americana]          326   3e-87
ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis...   325   4e-87
gb|ACF35670.1| ATP synthase beta subunit [Catalepidia heyana]         325   5e-87
gb|ACF35665.1| ATP synthase beta subunit [Malagasia alticola]         325   5e-87

>gb|ABW74605.1| ATP synthase beta subunit [Krapfia ranunculina]
          Length = 486

 Score =  326 bits (835), Expect = 3e-87
 Identities = 165/167 (98%), Positives = 165/167 (98%)
 Frame = -1

Query: 573 LSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQINVTCEVQ 394
           LSGPGVSALEEKNLGRIAQIIGPVLDVSFP GKMPNIYNALVVKGQDTVGQQINVTCEVQ
Sbjct: 3   LSGPGVSALEEKNLGRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQDTVGQQINVTCEVQ 62

Query: 393 QLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 214
           QLLGNNRVR VAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT
Sbjct: 63  QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 122

Query: 213 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 73
           RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG
Sbjct: 123 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 169


>gb|ABW74590.1| ATP synthase beta subunit [Anemone americana]
          Length = 493

 Score =  326 bits (835), Expect = 3e-87
 Identities = 165/167 (98%), Positives = 165/167 (98%)
 Frame = -1

Query: 573 LSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQINVTCEVQ 394
           LSGPGVSALEEKNLGRIAQIIGPVLDVSFP GKMPNIYNALVVKGQDTVGQQINVTCEVQ
Sbjct: 2   LSGPGVSALEEKNLGRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQDTVGQQINVTCEVQ 61

Query: 393 QLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 214
           QLLGNNRVR VAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT
Sbjct: 62  QLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDT 121

Query: 213 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 73
           RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG
Sbjct: 122 RTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 168


>ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis saniculifolia]
           gi|226933889|gb|ACO92022.1| ATP synthase CF1 beta
           subunit [Megaleranthis saniculifolia]
          Length = 498

 Score =  325 bits (834), Expect = 4e-87
 Identities = 165/172 (95%), Positives = 167/172 (97%)
 Frame = -1

Query: 588 RGHSTLSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQINV 409
           R + T SGPGVSALEEKNLGRIAQIIGPVLDVSFP GKMPNIYNALVVKGQDTVGQQINV
Sbjct: 2   RINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPLGKMPNIYNALVVKGQDTVGQQINV 61

Query: 408 TCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNL 229
           TCEVQQLLGNNRVR VAMSATDGLMRGMEV+DTGAPLSVPVGGATLGRIFNVLGEPVDNL
Sbjct: 62  TCEVQQLLGNNRVRAVAMSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNL 121

Query: 228 GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 73
           GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG
Sbjct: 122 GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 173


>gb|ACF35670.1| ATP synthase beta subunit [Catalepidia heyana]
          Length = 495

 Score =  325 bits (833), Expect = 5e-87
 Identities = 164/172 (95%), Positives = 168/172 (97%)
 Frame = -1

Query: 588 RGHSTLSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQINV 409
           R + T SGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNAL+VKG+DTVGQQINV
Sbjct: 2   RINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGRDTVGQQINV 61

Query: 408 TCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNL 229
           TCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNL
Sbjct: 62  TCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNL 121

Query: 228 GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 73
           GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG
Sbjct: 122 GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 173


>gb|ACF35665.1| ATP synthase beta subunit [Malagasia alticola]
          Length = 497

 Score =  325 bits (833), Expect = 5e-87
 Identities = 164/172 (95%), Positives = 168/172 (97%)
 Frame = -1

Query: 588 RGHSTLSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQINV 409
           R + T SGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNAL+VKG+DTVGQQINV
Sbjct: 2   RINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGRDTVGQQINV 61

Query: 408 TCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNL 229
           TCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNL
Sbjct: 62  TCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNL 121

Query: 228 GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 73
           GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG
Sbjct: 122 GPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 173


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