BLASTX nr result

ID: Coptis23_contig00027277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027277
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78634.1| korrigan [Populus tomentosa]                           152   4e-35
ref|XP_002321833.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
ref|XP_002510938.1| endo-1,4-beta-glucanase, putative [Ricinus c...   150   8e-35
ref|XP_002321834.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
emb|CBI24580.3| unnamed protein product [Vitis vinifera]              144   6e-33

>gb|AFZ78634.1| korrigan [Populus tomentosa]
          Length = 490

 Score =  152 bits (383), Expect = 4e-35
 Identities = 82/153 (53%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = -2

Query: 450 ELLWAAAWLYKASKNQSYWDYVVENVHLLGSSRENDKIGEFGWDDKHAGFFVLLAS---D 280
           EL+W AAWL KA++   YWDYVV+N+  LG S     I EFGWD KH+G  +L++    D
Sbjct: 238 ELIWGAAWLSKATQEPKYWDYVVKNIATLGGS-----IFEFGWDSKHSGINILVSPIYFD 292

Query: 279 LIMKGAPANNTFRTAADAFVCTVLPESSTIDVTYSPGGLMFKKGGSNMQHPTALSFLLLI 100
                + + ++F T AD+FVC++LPES T  VTYSPGGLMFK GGSN+QH TALSFLL++
Sbjct: 293 RQKVMSSSGSSFITNADSFVCSLLPESPTKSVTYSPGGLMFKPGGSNLQHATALSFLLIV 352

Query: 99  YARYLNRANYKLVDCDGGKATGSQRLIEIANGQ 1
           Y+RYL  AN + V C    AT S RL+E+A  Q
Sbjct: 353 YSRYLQAAN-RSVHCGSVVATPS-RLVEVAKTQ 383


>ref|XP_002321833.1| predicted protein [Populus trichocarpa] gi|222868829|gb|EEF05960.1|
           predicted protein [Populus trichocarpa]
           gi|347466565|gb|AEO97195.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466619|gb|AEO97222.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|429326586|gb|AFZ78633.1| korrigan [Populus tomentosa]
          Length = 487

 Score =  151 bits (381), Expect = 6e-35
 Identities = 81/159 (50%), Positives = 106/159 (66%), Gaps = 9/159 (5%)
 Frame = -2

Query: 450 ELLWAAAWLYKASKNQSYWDYVVENVHLLGSS--RENDKIG-------EFGWDDKHAGFF 298
           EL+W AAWLY+A+K  +YW YVV+N+  L  +  +  D++G       EFGWD K+AG  
Sbjct: 221 ELIWGAAWLYRATKAPNYWSYVVQNISNLEKNVAKHTDRVGYGGGSFAEFGWDTKNAGIN 280

Query: 297 VLLASDLIMKGAPANNTFRTAADAFVCTVLPESSTIDVTYSPGGLMFKKGGSNMQHPTAL 118
           +L++  L+         F   AD FVCTVLPES T+ V+YSPGGL+FK GGSN+QH TAL
Sbjct: 281 ILVSKLLLSSKTSDVGPFIPNADKFVCTVLPESPTVYVSYSPGGLLFKPGGSNLQHATAL 340

Query: 117 SFLLLIYARYLNRANYKLVDCDGGKATGSQRLIEIANGQ 1
           SFLLL YARYLN++N + + C    AT + RLI+ A GQ
Sbjct: 341 SFLLLAYARYLNQSN-REIHCGNVVATPA-RLIQFARGQ 377


>ref|XP_002510938.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223550053|gb|EEF51540.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 503

 Score =  150 bits (380), Expect = 8e-35
 Identities = 82/159 (51%), Positives = 103/159 (64%), Gaps = 9/159 (5%)
 Frame = -2

Query: 450 ELLWAAAWLYKASKNQSYWDYVVENVHLL---------GSSRENDKIGEFGWDDKHAGFF 298
           EL+W AAWLYKA+K+ +YW+YVV N+  L         G S       EFGWD KHAG  
Sbjct: 238 ELIWGAAWLYKATKDPNYWNYVVNNIKDLENAVVKNIDGVSYSGGSFAEFGWDAKHAGIN 297

Query: 297 VLLASDLIMKGAPANNTFRTAADAFVCTVLPESSTIDVTYSPGGLMFKKGGSNMQHPTAL 118
           VL++  L    A + + F   AD FVC+VLPES T+ V+YSPGG +FK GGSN QH TAL
Sbjct: 298 VLVSRLLKSAKASSLDPFIPNADKFVCSVLPESPTVSVSYSPGGFLFKPGGSNSQHATAL 357

Query: 117 SFLLLIYARYLNRANYKLVDCDGGKATGSQRLIEIANGQ 1
           SFLLL Y+RYLN+AN +++ C    AT S RL++ A  Q
Sbjct: 358 SFLLLAYSRYLNQAN-RVIHCGNVVAT-SARLVQFARIQ 394


>ref|XP_002321834.1| predicted protein [Populus trichocarpa] gi|222868830|gb|EEF05961.1|
           predicted protein [Populus trichocarpa]
           gi|347466567|gb|AEO97196.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466621|gb|AEO97223.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 490

 Score =  147 bits (372), Expect = 7e-34
 Identities = 80/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = -2

Query: 450 ELLWAAAWLYKASKNQSYWDYVVENVHLLGSSRENDKIGEFGWDDKHAGFFVLLAS---D 280
           EL+W AAWL KA+++  YWDYVV+N+  LG S     I EFGWD KH+G  ++++    D
Sbjct: 238 ELIWGAAWLSKATQDPKYWDYVVKNMATLGGS-----IFEFGWDSKHSGINIIVSPIYFD 292

Query: 279 LIMKGAPANNTFRTAADAFVCTVLPESSTIDVTYSPGGLMFKKGGSNMQHPTALSFLLLI 100
                + + ++F T AD+FVC++LPES T  VTYSPGGLMFK GG N+QH TALSFLL++
Sbjct: 293 PQKVMSSSGSSFITNADSFVCSLLPESPTKSVTYSPGGLMFKPGGCNLQHATALSFLLIV 352

Query: 99  YARYLNRANYKLVDCDGGKATGSQRLIEIANGQ 1
           Y+RYL  AN + V C    AT S RL+E+A  Q
Sbjct: 353 YSRYLQVAN-RSVHCGSVVATPS-RLVEVAKTQ 383


>emb|CBI24580.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  144 bits (364), Expect = 6e-33
 Identities = 77/150 (51%), Positives = 99/150 (66%)
 Frame = -2

Query: 450 ELLWAAAWLYKASKNQSYWDYVVENVHLLGSSRENDKIGEFGWDDKHAGFFVLLASDLIM 271
           EL+WAAAWLYKA+ NQSYWDYV+++++ L          EFGWD KHAG  +L+ S L++
Sbjct: 221 ELIWAAAWLYKATNNQSYWDYVLKHINSL------PHFAEFGWDSKHAGINILV-SKLVI 273

Query: 270 KGAPANNTFRTAADAFVCTVLPESSTIDVTYSPGGLMFKKGGSNMQHPTALSFLLLIYAR 91
                 + F   AD F C++LPES T  VTYSPGGL+FK G  NMQH TALSFLLL+Y+R
Sbjct: 274 DRQLNPSPFVFNADKFACSILPESPTKSVTYSPGGLLFKPGSCNMQHVTALSFLLLVYSR 333

Query: 90  YLNRANYKLVDCDGGKATGSQRLIEIANGQ 1
           Y N A  + + CD      S RL+++A  Q
Sbjct: 334 YSNDAQ-RGIQCDNFVVPPS-RLVQVAQSQ 361


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