BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027275
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21655.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog ...    75   7e-12
ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog ...    75   7e-12
ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog ...    60   2e-07
gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japo...    57   2e-06

>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/63 (58%), Positives = 51/63 (80%)
 Frame = -3

Query: 190 QKHSYREYMPSTWQIFVTHRVLMQVLDEDLDNSKHQIQSTYVSQWLLPSLSFLDKFRVKD 11
           QK SYRE+MP  WQ FVTHR+L++  D+D  NSK+Q +S ++S+WL+PSL+F DKF V+D
Sbjct: 259 QKLSYREFMPLVWQSFVTHRILVRAADDDPANSKYQSRSIFLSEWLMPSLNFSDKFIVRD 318

Query: 10  AGI 2
           AG+
Sbjct: 319 AGV 321


>ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 310

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/63 (55%), Positives = 44/63 (69%)
 Frame = -3

Query: 190 QKHSYREYMPSTWQIFVTHRVLMQVLDEDLDNSKHQIQSTYVSQWLLPSLSFLDKFRVKD 11
           Q + YREYMPS WQ FVTHR+L++  DE    + +Q  S Y+ +WLLP LSF DK  VKD
Sbjct: 244 QNYLYREYMPSVWQSFVTHRILVRSSDEHPVTTNNQNSSFYLLEWLLPRLSFPDKIVVKD 303

Query: 10  AGI 2
           AG+
Sbjct: 304 AGV 306


>ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 264

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = -3

Query: 190 QKHSYREYMPSTWQIFVTHRVLMQVLDEDLDNSKHQIQSTYVSQWLLPSLSFLDKFRVKD 11
           Q   YREYMPS WQ FVTHR+L++  DE    + +Q  S Y+ +WLLP LSF DK  VKD
Sbjct: 198 QNFQYREYMPSVWQSFVTHRILVRSSDEHPVTTNYQNSSFYLLEWLLPRLSFPDKIVVKD 257

Query: 10  AGI 2
           AG+
Sbjct: 258 AGV 260


>ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog [Brachypodium
           distachyon]
          Length = 335

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/60 (41%), Positives = 39/60 (65%)
 Frame = -3

Query: 181 SYREYMPSTWQIFVTHRVLMQVLDEDLDNSKHQIQSTYVSQWLLPSLSFLDKFRVKDAGI 2
           S REYMPS WQ FVTHR+ +Q         + ++ S + S+W+ PSL+  +KF ++D+G+
Sbjct: 272 SCREYMPSVWQTFVTHRIKLQEESGISSEQESEVLSIHTSEWVRPSLNIKEKFYIRDSGV 331


>gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japonica Group]
          Length = 284

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
 Frame = -3

Query: 181 SYREYMPSTWQIFVTHRVLMQVLDEDLD---NSKHQIQSTYVSQWLLPSLSFLDKFRVKD 11
           SYRE+MPS WQ FVTHR+ +Q L ++ +     +++      S+W+ PSL+  DKF + D
Sbjct: 218 SYREFMPSVWQSFVTHRIKLQDLGQEAELFSGQENKELPLRTSEWMQPSLNTKDKFSITD 277

Query: 10  AGI 2
            G+
Sbjct: 278 DGV 280