BLASTX nr result

ID: Coptis23_contig00027268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027268
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60861.1| hypothetical protein VITISV_009889 [Vitis vinifera]    70   5e-12
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]    73   8e-12
emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]    73   8e-12
emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]    72   1e-11
ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249...    72   1e-11

>emb|CAN60861.1| hypothetical protein VITISV_009889 [Vitis vinifera]
          Length = 1300

 Score = 69.7 bits (169), Expect(2) = 5e-12
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
 Frame = -1

Query: 420  LPC*HLGLPIEAKYKHKEAWDSV--------ICFKES*AAGNVP*QICQFT--SCPFSQF 271
            LP  +LGLP+ A +K    WD V          +K    +      + + T  S P  Q 
Sbjct: 1054 LPSVYLGLPLGAHHKAISMWDGVEERMRRRLALWKRQYISKGRRITLIKSTLASIPIYQL 1113

Query: 270  ------QSVADRLEEIV*DFLWGSSKERIKFHLVT*DQVCSPIREEGLGFRHFRHMNEAL 109
                  + VA RLE++  DFLWG  +   K HL+  + VC+     GLG R    +N+AL
Sbjct: 1114 SLFRMPKIVARRLEKLQRDFLWGGGRMERKIHLINWEVVCTQXEXGGLGIRKIDLLNKAL 1173

Query: 108  LGKCIWRFGKETNALWR 58
            +GK IWRF  E + LW+
Sbjct: 1174 MGKWIWRFAFEKDILWK 1190



 Score = 25.8 bits (55), Expect(2) = 5e-12
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 59   EIIFAKYGVENDGWWLKE 6
            ++I  KYG E  GWW  E
Sbjct: 1191 KVIGVKYGQEGFGWWTNE 1208


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score = 72.8 bits (177), Expect(2) = 8e-12
 Identities = 49/142 (34%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
 Frame = -1

Query: 420  LPC*HLGLPIEAKYKHKEAWDSV---------------------ICFKES*AAGNVP*QI 304
            LP  +LGLP+ A +K   +WD V                     I   +S  A ++P   
Sbjct: 1430 LPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKKQYISKGGRITLIKSTLA-SIPIYF 1488

Query: 303  CQFTSCPFSQFQSVADRLEEIV*DFLWGSSKERIKFHLVT*DQVCSPIREEGLGFRHFRH 124
                  P    +SV  R+E+I  DFLWG      K HL+    VCSP  E GLG R    
Sbjct: 1489 LSLIRIP----KSVTKRIEKIQKDFLWGGGSLERKAHLIKWKVVCSPKEEGGLGIRKIDL 1544

Query: 123  MNEALLGKCIWRFGKETNALWR 58
            +N+ALLGK +WR+  E   LW+
Sbjct: 1545 LNKALLGKWVWRYAYEKENLWK 1566



 Score = 21.9 bits (45), Expect(2) = 8e-12
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 56   IIFAKYGVENDGWWLKEI 3
            +I  KYG E  GW  K++
Sbjct: 1568 VIGVKYGQEGCGWRTKDV 1585


>emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]
          Length = 666

 Score = 73.2 bits (178), Expect(2) = 8e-12
 Identities = 49/143 (34%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
 Frame = -1

Query: 423 LLPC*HLGLPIEAKYKHKEAWDSV---------------------ICFKES*AAGNVP*Q 307
           +LP  +LGLP+ A +K   +WD V                     I   +S  A ++P  
Sbjct: 384 VLPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQYISKGGRITLIKSTLA-SIPIY 442

Query: 306 ICQFTSCPFSQFQSVADRLEEIV*DFLWGSSKERIKFHLVT*DQVCSPIREEGLGFRHFR 127
                  P    +SV  R+E+I  DFLWG      K HL+    VCSP  E GLG R   
Sbjct: 443 FLSLIRIP----KSVTKRIEKIQRDFLWGGGSLERKAHLIKWKVVCSPKEEGGLGIRKID 498

Query: 126 HMNEALLGKCIWRFGKETNALWR 58
            +N+ALLGK +WR+  E   LW+
Sbjct: 499 LLNKALLGKWVWRYAYEKENLWK 521



 Score = 21.6 bits (44), Expect(2) = 8e-12
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 56  IIFAKYGVENDGWWLKEI 3
           +I  KYG +  GW  KE+
Sbjct: 523 VIGVKYGQKECGWRTKEV 540


>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
          Length = 1653

 Score = 72.4 bits (176), Expect(2) = 1e-11
 Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
 Frame = -1

Query: 420  LPC*HLGLPIEAKYKHKEAWDSV----------------------ICFKES*AAGNVP*Q 307
            LP  +LGLP+ A +K+  +WD V                         K + A+  +P  
Sbjct: 1334 LPAVYLGLPLGANHKNASSWDGVEERMRRRLAQWKRQYISKGGRMTLIKSTLAS--IPIY 1391

Query: 306  ICQFTSCPFSQFQSVADRLEEIV*DFLWGSSKERIKFHLVT*DQVCSPIREEGLGFRHFR 127
            +      P    + VA R+E+I  DFLWG      K HL+    VCSP  E GLG R   
Sbjct: 1392 LLSLIRIP----KVVAKRIEKIQRDFLWGGGSLEGKGHLINWQVVCSPKEEGGLGIRKID 1447

Query: 126  HMNEALLGKCIWRFGKETNALWR 58
             +N+ LLGK +WR+  E + LW+
Sbjct: 1448 LLNKTLLGKWVWRYAYEKDNLWK 1470



 Score = 21.9 bits (45), Expect(2) = 1e-11
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 53   IFAKYGVENDGWWLKEI 3
            I  KYG E  GW  KE+
Sbjct: 1473 IGVKYGQEGCGWRTKEV 1489


>ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249836 [Vitis vinifera]
          Length = 1552

 Score = 72.4 bits (176), Expect(2) = 1e-11
 Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
 Frame = -1

Query: 420 LPC*HLGLPIEAKYKHKEAWDSV----------------------ICFKES*AAGNVP*Q 307
           LP  +LGLP+ A +K+  +WD V                         K + A+  +P  
Sbjct: 292 LPAVYLGLPLGANHKNASSWDGVEERMRRRLAQWKRQYISKGGRMTLIKSTLAS--IPIY 349

Query: 306 ICQFTSCPFSQFQSVADRLEEIV*DFLWGSSKERIKFHLVT*DQVCSPIREEGLGFRHFR 127
           +      P    + VA R+E+I  DFLWG      K HL+    VCSP  E GLG R   
Sbjct: 350 LLSLIRIP----KVVAKRIEKIQRDFLWGGGSLEGKGHLINWQVVCSPKEEGGLGIRKID 405

Query: 126 HMNEALLGKCIWRFGKETNALWR 58
            +N+ LLGK +WR+  E + LW+
Sbjct: 406 LLNKTLLGKWVWRYAYEKDNLWK 428



 Score = 21.9 bits (45), Expect(2) = 1e-11
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 53  IFAKYGVENDGWWLKEI 3
           I  KYG E  GW  KE+
Sbjct: 431 IGVKYGQEGCGWRTKEV 447


Top