BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027255
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    92   5e-17
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    88   1e-15
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...    87   2e-15
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    83   4e-14

>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
 Frame = -1

Query: 557 KVYKLNERKQQWVHVESIGNYMFFVGNQSSFSISALKFLPGHKGNAILFTEDYFYDDNHA 378
           KV+KLNE  + W+ V+++ + + F+G+ S+FS SA + L G KGN I F +++FY     
Sbjct: 292 KVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASE-LSGCKGNCIFFEDNFFYSREEG 350

Query: 377 DQA--LHHDIGVFNLEGSSFGKLKDYPSFSTLFWPPLNWIA 261
           D    +  DIGVF LE    G L+++P +S +FWPP +WIA
Sbjct: 351 DDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWIA 391


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/100 (43%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -1

Query: 557 KVYKLNERKQQWVHVESIGNYMFFVGNQSSFSISALKFLPGHKGNAILFTEDYFYDDNHA 378
           KV++L++R+Q+WV +ES+G+ + F+G+ SSFS  A  F  G KGN+I FT   F+ D   
Sbjct: 283 KVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFY-GCKGNSICFTNISFFSDAEE 341

Query: 377 DQALHH-DIGVFNLEGSSFGKLKDYPSFSTLFWPPLNWIA 261
           D A     IGVF+L+  S G L  Y ++S   WPP  W++
Sbjct: 342 DDASRSGTIGVFDLDSGSIGPLSSYANYSKTIWPPPAWVS 381


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
 Frame = -1

Query: 557 KVYKLNERKQQWVHVESIGNYMFFVGNQSSFSISALKFLPGHKGNAILFTEDYFYDDNHA 378
           KV+KLNE  + W+ V  + + + F+G+  +FS SA + L G KGN I F +D+FY     
Sbjct: 292 KVFKLNEEGKCWIEVNDLEDRVLFLGDDLTFSASASE-LSGCKGNCIFFNDDFFYSRGEG 350

Query: 377 DQA--LHHDIGVFNLEGSSFGKLKDYPSFSTLFWPPLNWIA 261
           D       DIGVF LE    G L+++P  S +FWPP +W+A
Sbjct: 351 DDGSLFGRDIGVFELESGCIGPLRNFPDNSKMFWPPPDWVA 391


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
 Frame = -1

Query: 557 KVYKLNERKQQWVHVESIGNYMFFVGNQSSFSISALKFLPGHKGNAILFTEDYFYDD--- 387
           KV+KL++  Q W+ V+S+G+ + F+G+ S+FS S +  L G KGN I F +++FY     
Sbjct: 231 KVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSAS-VSDLSGCKGNCIFFVDNFFYSRDEN 289

Query: 386 ---NHADQAL--HHDIGVFNLEGSSFGKLKDYPSFSTLFWPPLNWI 264
              N  D  +    DIGVF+LE    G L +YP ++ +FWPP +W+
Sbjct: 290 LRANGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMFWPPPHWL 335


>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 38/98 (38%), Positives = 62/98 (63%)
 Frame = -1

Query: 557 KVYKLNERKQQWVHVESIGNYMFFVGNQSSFSISALKFLPGHKGNAILFTEDYFYDDNHA 378
           KV+KLN+    WV VE++G+ + F+G +S+FS  A +F  G +GN I +T  +F+ ++  
Sbjct: 272 KVFKLNQIGHMWVEVENLGDRILFLGEKSTFSAVASEFC-GCEGNCIYYTNSFFFPNDQE 330

Query: 377 DQALHHDIGVFNLEGSSFGKLKDYPSFSTLFWPPLNWI 264
           D A +  IG+FNLE  + G L  +P++S + W P  W+
Sbjct: 331 DDA-YTGIGIFNLENGNLGPLSSFPNYSKVIWSPPAWV 367