BLASTX nr result

ID: Coptis23_contig00027223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027223
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330023.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_002318938.1| predicted protein [Populus trichocarpa] gi|1...   186   1e-45
ref|XP_004151115.1| PREDICTED: protein ECHIDNA-like [Cucumis sat...   184   6e-45
gb|AAD18099.1| T31J12.5 [Arabidopsis thaliana]                        184   6e-45
ref|NP_563842.1| uncharacterized protein [Arabidopsis thaliana] ...   184   6e-45

>ref|XP_002330023.1| predicted protein [Populus trichocarpa] gi|222871448|gb|EEF08579.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/92 (97%), Positives = 91/92 (98%)
 Frame = +3

Query: 3   HVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 182
           HVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL
Sbjct: 20  HVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 79

Query: 183 GESVWKYECLDQESLARMNKKDSWLFWWTLYI 278
           GESVWK+E LDQESLARMNKKDSWLFWWTLYI
Sbjct: 80  GESVWKFESLDQESLARMNKKDSWLFWWTLYI 111


>ref|XP_002318938.1| predicted protein [Populus trichocarpa] gi|118489799|gb|ABK96699.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222857314|gb|EEE94861.1| predicted protein [Populus
           trichocarpa]
          Length = 183

 Score =  186 bits (473), Expect = 1e-45
 Identities = 88/92 (95%), Positives = 90/92 (97%)
 Frame = +3

Query: 3   HVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 182
           HVLFKAGALAFYILS LFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL
Sbjct: 20  HVLFKAGALAFYILSTLFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 79

Query: 183 GESVWKYECLDQESLARMNKKDSWLFWWTLYI 278
           GESVWK+E LDQESLARMNKKDSWLFWWTLY+
Sbjct: 80  GESVWKFESLDQESLARMNKKDSWLFWWTLYL 111


>ref|XP_004151115.1| PREDICTED: protein ECHIDNA-like [Cucumis sativus]
          Length = 183

 Score =  184 bits (467), Expect = 6e-45
 Identities = 86/92 (93%), Positives = 90/92 (97%)
 Frame = +3

Query: 3   HVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 182
           HVLFKAGALAFYILS+LFFNSFVIIFVVTV LAALDFWVVKNVSGRILVGLRWWNEINDL
Sbjct: 20  HVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDL 79

Query: 183 GESVWKYECLDQESLARMNKKDSWLFWWTLYI 278
           GESVWK+E LDQESL+RMNKKDSWLFWWTLY+
Sbjct: 80  GESVWKFESLDQESLSRMNKKDSWLFWWTLYL 111


>gb|AAD18099.1| T31J12.5 [Arabidopsis thaliana]
          Length = 244

 Score =  184 bits (467), Expect = 6e-45
 Identities = 87/92 (94%), Positives = 89/92 (96%)
 Frame = +3

Query: 3   HVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 182
           HVLFK  ALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL
Sbjct: 23  HVLFKGAALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 82

Query: 183 GESVWKYECLDQESLARMNKKDSWLFWWTLYI 278
           GESVWK+E LDQESLARMNKKDSWLFWWTLY+
Sbjct: 83  GESVWKFESLDQESLARMNKKDSWLFWWTLYL 114


>ref|NP_563842.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297849238|ref|XP_002892500.1| hypothetical protein
           ARALYDRAFT_471024 [Arabidopsis lyrata subsp. lyrata]
           gi|38257656|sp|Q8LEK2.1|FA18_ARATH RecName: Full=Protein
           ECHIDNA gi|21553515|gb|AAM62608.1| unknown [Arabidopsis
           thaliana] gi|28466859|gb|AAO44038.1| At1g09330
           [Arabidopsis thaliana] gi|110736505|dbj|BAF00220.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|297338342|gb|EFH68759.1| hypothetical protein
           ARALYDRAFT_471024 [Arabidopsis lyrata subsp. lyrata]
           gi|332190309|gb|AEE28430.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 186

 Score =  184 bits (467), Expect = 6e-45
 Identities = 87/92 (94%), Positives = 89/92 (96%)
 Frame = +3

Query: 3   HVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 182
           HVLFK  ALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL
Sbjct: 23  HVLFKGAALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDL 82

Query: 183 GESVWKYECLDQESLARMNKKDSWLFWWTLYI 278
           GESVWK+E LDQESLARMNKKDSWLFWWTLY+
Sbjct: 83  GESVWKFESLDQESLARMNKKDSWLFWWTLYL 114


Top