BLASTX nr result

ID: Coptis23_contig00027199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027199
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329230.1| predicted protein [Populus trichocarpa] gi|2...   217   1e-54
ref|XP_002264336.1| PREDICTED: reticuline oxidase-like [Vitis vi...   214   6e-54
ref|XP_002533924.1| d-lactate dehydrogenase, putative [Ricinus c...   209   3e-52
ref|XP_003634619.1| PREDICTED: LOW QUALITY PROTEIN: reticuline o...   203   2e-50
emb|CBI16966.3| unnamed protein product [Vitis vinifera]              203   2e-50

>ref|XP_002329230.1| predicted protein [Populus trichocarpa] gi|222871011|gb|EEF08142.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  217 bits (552), Expect = 1e-54
 Identities = 103/158 (65%), Positives = 127/158 (80%), Gaps = 3/158 (1%)
 Frame = +3

Query: 69  PSLSAPTDLVTSCLTTNHVTNFTLNP---KSDNDSSYYNLLNFSIQNLRFVESTFTKPIA 239
           PSL AP D +TSCLTT+ + NFT  P   K D+  +YY +L+FSIQNLRF E T  KP+A
Sbjct: 8   PSLCAPEDQITSCLTTHDINNFTTLPSTKKDDDSKTYYKILDFSIQNLRFTEPTIAKPLA 67

Query: 240 IVLPKTKEQLVSTVLCCRQAMLVIRIRCGGHSYEGLSSVASYGAPFVIIDMMNLNSVSVD 419
           I+LP + ++LV +V+CCR+ +L IR+RCGGHSYEG SSVA+ GAPFVIIDMMNLN VSV 
Sbjct: 68  IILPGSLDELVKSVMCCREGLLEIRVRCGGHSYEGTSSVANDGAPFVIIDMMNLNKVSVH 127

Query: 420 MESKTAWVEGGATLGETYYGIAESSDSHGFTAGSCPTV 533
           +E++TAWVEGGATLGETY  I+E+S  HGF+AGSCPTV
Sbjct: 128 LETETAWVEGGATLGETYSAISEASSIHGFSAGSCPTV 165


>ref|XP_002264336.1| PREDICTED: reticuline oxidase-like [Vitis vinifera]
          Length = 540

 Score =  214 bits (546), Expect = 6e-54
 Identities = 102/151 (67%), Positives = 125/151 (82%), Gaps = 1/151 (0%)
 Frame = +3

Query: 84  PTDLVTSCLTTNHVTNFTLNPKSDNDS-SYYNLLNFSIQNLRFVESTFTKPIAIVLPKTK 260
           PTDL++SCLT ++V NFT+ P   N+S +YY LLNFSIQNLR+   T  KP+AIVLP+++
Sbjct: 27  PTDLISSCLTRHNVNNFTVLPHKQNESPAYYRLLNFSIQNLRYAVPTAPKPVAIVLPQSR 86

Query: 261 EQLVSTVLCCRQAMLVIRIRCGGHSYEGLSSVASYGAPFVIIDMMNLNSVSVDMESKTAW 440
           EQLV+TV CCR+ +  IR+RCGGHSYEG SSV   G PFVIIDMM+LN V VD+ES+TAW
Sbjct: 87  EQLVNTVSCCREGLFEIRVRCGGHSYEGTSSVVLDGNPFVIIDMMSLNQVLVDLESETAW 146

Query: 441 VEGGATLGETYYGIAESSDSHGFTAGSCPTV 533
           VEGGATLGETYY +AE+S+ HGF+AGSCPTV
Sbjct: 147 VEGGATLGETYYAVAEASNVHGFSAGSCPTV 177


>ref|XP_002533924.1| d-lactate dehydrogenase, putative [Ricinus communis]
           gi|223526119|gb|EEF28466.1| d-lactate dehydrogenase,
           putative [Ricinus communis]
          Length = 546

 Score =  209 bits (531), Expect = 3e-52
 Identities = 106/156 (67%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
 Frame = +3

Query: 69  PSLSAPTDLVTSCLTTNHVTNFTLNPKSDNDSS-YYNLLNFSIQNLRFVESTFTKPIAIV 245
           PSLS   +  TSCLT N ++NFT  P S NDS+ YYNLL FSIQNLRF +    KP+AIV
Sbjct: 22  PSLSVIANQFTSCLTQNLISNFTTFPSSKNDSTDYYNLLEFSIQNLRFADLEMPKPLAIV 81

Query: 246 LPKTKEQLVSTVLCCRQAMLVIRIRCGGHSYEGLSSVASYGAPFVIIDMMNLNSVSVDME 425
           +P+T E+LV TV CCR+A L IR+RCGGHSYEG S VAS GA FV+IDMMNLN VSVD+E
Sbjct: 82  IPETVEELVKTVTCCREAFLEIRVRCGGHSYEGTSYVASDGATFVVIDMMNLNKVSVDLE 141

Query: 426 SKTAWVEGGATLGETYYGIAESSDSHGFTAGSCPTV 533
           +K A VEGGATLGETY  IAE+S  HGF+AGSCPTV
Sbjct: 142 AKMAVVEGGATLGETYAAIAEASGVHGFSAGSCPTV 177


>ref|XP_003634619.1| PREDICTED: LOW QUALITY PROTEIN: reticuline oxidase-like [Vitis
           vinifera]
          Length = 712

 Score =  203 bits (516), Expect = 2e-50
 Identities = 96/157 (61%), Positives = 123/157 (78%), Gaps = 1/157 (0%)
 Frame = +3

Query: 66  VPSLSAPTDLVTSCLTTNHVTNFTLNPKSDNDS-SYYNLLNFSIQNLRFVESTFTKPIAI 242
           VP    PTD+++SCL  ++V NFTL P + + S  YY LLNFS+QNLR+   T  KP+AI
Sbjct: 141 VPCFCDPTDIISSCLIRHNVYNFTLLPHNGSQSPDYYRLLNFSLQNLRYAVPTAPKPVAI 200

Query: 243 VLPKTKEQLVSTVLCCRQAMLVIRIRCGGHSYEGLSSVASYGAPFVIIDMMNLNSVSVDM 422
            +P++ +QLV+++ CCR+     R+RCGGHSYEG+SSV   G PFVIIDMM+LN VSVD+
Sbjct: 201 AIPQSLKQLVNSMRCCREGWYEFRVRCGGHSYEGISSVVPDGNPFVIIDMMSLNQVSVDV 260

Query: 423 ESKTAWVEGGATLGETYYGIAESSDSHGFTAGSCPTV 533
           ES+TAWVEGGATLGETYY +AE+S+ HGF+AGSCPTV
Sbjct: 261 ESETAWVEGGATLGETYYAVAEASNVHGFSAGSCPTV 297


>emb|CBI16966.3| unnamed protein product [Vitis vinifera]
          Length = 790

 Score =  203 bits (516), Expect = 2e-50
 Identities = 96/157 (61%), Positives = 123/157 (78%), Gaps = 1/157 (0%)
 Frame = +3

Query: 66  VPSLSAPTDLVTSCLTTNHVTNFTLNPKSDNDS-SYYNLLNFSIQNLRFVESTFTKPIAI 242
           VP    PTD+++SCL  ++V NFTL P + + S  YY LLNFS+QNLR+   T  KP+AI
Sbjct: 297 VPCFCDPTDIISSCLIRHNVYNFTLLPHNGSQSPDYYRLLNFSLQNLRYAVPTAPKPVAI 356

Query: 243 VLPKTKEQLVSTVLCCRQAMLVIRIRCGGHSYEGLSSVASYGAPFVIIDMMNLNSVSVDM 422
            +P++ +QLV+++ CCR+     R+RCGGHSYEG+SSV   G PFVIIDMM+LN VSVD+
Sbjct: 357 AIPQSLKQLVNSMRCCREGWYEFRVRCGGHSYEGISSVVPDGNPFVIIDMMSLNQVSVDV 416

Query: 423 ESKTAWVEGGATLGETYYGIAESSDSHGFTAGSCPTV 533
           ES+TAWVEGGATLGETYY +AE+S+ HGF+AGSCPTV
Sbjct: 417 ESETAWVEGGATLGETYYAVAEASNVHGFSAGSCPTV 453



 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 36/47 (76%), Positives = 43/47 (91%)
 Frame = +3

Query: 393 MNLNSVSVDMESKTAWVEGGATLGETYYGIAESSDSHGFTAGSCPTV 533
           M+LN V VD+ES+TAWVEGGATLGETYY +AE+S+ HGF+AGSCPTV
Sbjct: 1   MSLNQVLVDLESETAWVEGGATLGETYYAVAEASNVHGFSAGSCPTV 47


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