BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027196
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thali...    67   1e-09
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    67   1e-09
emb|CAN77052.1| hypothetical protein VITISV_002154 [Vitis vinifera]    67   2e-09
emb|CAN72557.1| hypothetical protein VITISV_013403 [Vitis vinifera]    67   2e-09
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   3e-09

>gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 199

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +2

Query: 11  IILEEILDEMKKKNGVQGG-MAIKLDMHKAFDQIECRFMFKVLKHFGFWKQWIDWIATCI 187
           ++  E+L  +K +   Q G +A+K D+ KA+D++E  F+ KV+   GF  +W+ WI TC+
Sbjct: 107 LVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCV 166

Query: 188 TT-SFSINLNGSPFG 229
           T+ S+ + +NGSP+G
Sbjct: 167 TSVSYEVLINGSPYG 181


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +2

Query: 11   IILEEILDEMKKKNGVQGG-MAIKLDMHKAFDQIECRFMFKVLKHFGFWKQWIDWIATCI 187
            ++  E+L  +K +   Q G +A+K D+ KA+D++E  F+ KV+   GF  +W+ WI TC+
Sbjct: 913  LVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCV 972

Query: 188  TT-SFSINLNGSPFG 229
            T+ S+ + +NGSP+G
Sbjct: 973  TSVSYEVLINGSPYG 987


>emb|CAN77052.1| hypothetical protein VITISV_002154 [Vitis vinifera]
          Length = 1962

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = +2

Query: 11  IILEEILDEMKKKNGVQGGMAIKLDMHKAFDQIECRFMFKVLKHFGFWKQWIDWIATCIT 190
           +I  E +D   K N  QGG+  KLD+ KAFD +  +F+  VLK  GF ++WI WI  CI+
Sbjct: 550 LIANEAVDSXLKXN--QGGVMCKLDIEKAFDXVGWKFLLAVLKQMGFGERWIMWIEWCIS 607

Query: 191 T-SFSINLNGSPFG 229
           T  +S+ +NGSP G
Sbjct: 608 TVRYSVLINGSPSG 621



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +2

Query: 11   IILEEILDEMKKKNGVQGGMAIKLDMHKAFDQIECRFMFKVLKHFGFWKQWIDWIATCIT 190
            +I  E +D   K N    G+  KLD+ KA++++   F+  VLK  GF ++WI WI  CI+
Sbjct: 1525 LIANEAVDSRLKDN--VRGVLCKLDIEKAYBRVSWSFLLAVLKKMGFGERWIKWIDWCIS 1582

Query: 191  T-SFSINLNGSP 223
            T  FS+ +NGSP
Sbjct: 1583 TVKFSVLINGSP 1594


>emb|CAN72557.1| hypothetical protein VITISV_013403 [Vitis vinifera]
          Length = 1557

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = +2

Query: 11   IILEEILDEMKKKNGVQGGMAIKLDMHKAFDQIECRFMFKVLKHFGFWKQWIDWIATCIT 190
            +I  E +D   K N  QGG+  KLD+ KA+D +  +F+  VLK  GF ++WI WI  CI+
Sbjct: 1105 LIANEAVDSRLKSN--QGGVMCKLDIEKAYDHVCWKFLLVVLKKMGFGERWIKWIEWCIS 1162

Query: 191  T-SFSINLNGSPFG 229
            T  FS+ +NGSP G
Sbjct: 1163 TVRFSVLINGSPSG 1176


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +2

Query: 11  IILEEILDEMKKKNGVQGGMAIKLDMHKAFDQIECRFMFKVLKHFGFWKQWIDWIATCIT 190
           +I  E+    K K G  G +AIKLDM KA+D++E ++++  +   GF   WI+WI +CI+
Sbjct: 567 LIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPIWIEWIRSCIS 626

Query: 191 T-SFSINLNGSP 223
           + SFS+ +NG P
Sbjct: 627 SASFSVLVNGIP 638