BLASTX nr result

ID: Coptis23_contig00027194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027194
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    70   2e-10
emb|CBI28434.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261...    69   3e-10
ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813...    69   4e-10
ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu...    69   4e-10

>ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101203985 [Cucumis sativus]
          Length = 465

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +2

Query: 101 DWLCPNPSCGNSNFARRRECNKCGTPSPGGGSD 199
           DW+CPNP CGN NFARR ECNKCG PSPGG SD
Sbjct: 103 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASD 135


>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
          Length = 873

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/38 (78%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +2

Query: 101 DWLCPNPSCGNSNFARRRECNKCGTPSP-GGGSDHESG 211
           DWLCPNPSCGN NFARR ECNKCG PSP G GSD   G
Sbjct: 621 DWLCPNPSCGNLNFARRVECNKCGAPSPAGAGSDRGGG 658


>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
          Length = 462

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/38 (78%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +2

Query: 101 DWLCPNPSCGNSNFARRRECNKCGTPSP-GGGSDHESG 211
           DWLCPNPSCGN NFARR ECNKCG PSP G GSD   G
Sbjct: 99  DWLCPNPSCGNLNFARRVECNKCGAPSPAGAGSDRGGG 136


>ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813547 [Glycine max]
          Length = 404

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +2

Query: 101 DWLCPNPSCGNSNFARRRECNKCGTPSPGGGSDHESG 211
           DW CPNPSCGN NFARR ECNKCG PSP G +D   G
Sbjct: 52  DWRCPNPSCGNLNFARRAECNKCGAPSPSGSNDRGGG 88


>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
           gi|223539602|gb|EEF41188.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 437

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 101 DWLCPNPSCGNSNFARRRECNKCGTPSPGGGSD 199
           DWLCPNPSCGN NFARR ECNKCGTPSP G ++
Sbjct: 99  DWLCPNPSCGNLNFARRVECNKCGTPSPAGANN 131


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