BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027193
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...    74   9e-12
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    72   5e-11
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    72   5e-11
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    72   5e-11
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    72   5e-11

>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/88 (38%), Positives = 47/88 (53%)
 Frame = +2

Query: 2   LGFKKFSDMNKPLLAKQSWRALKDKSSIWYQTFNAAYGRRGMGKEQNLPSNVSYFWRGVN 181
           LGF+     N  +LAKQ WR LK+  S+  +   A Y   G   +      +SY WR + 
Sbjct: 163 LGFRDIHSFNMAMLAKQGWRLLKEPESLCARVLKAKYHPNGSVLDAQPRRGMSYSWRSIL 222

Query: 182 KSFDLVNKGSIWTIGDGAHTSVFSDPWL 265
              ++V KG IW +GDGA   ++SDPWL
Sbjct: 223 LGLEVVKKGMIWRVGDGAGIHIWSDPWL 250


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = +2

Query: 2    LGFKKFSDMNKPLLAKQSWRALKDKSSIWYQTFNAAYGRRGMGKEQNLPSNVSYFWRGVN 181
            LGF+     N  +LAKQ WR ++D  S+  +   A Y   G        SNVSY WR + 
Sbjct: 1109 LGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQ 1168

Query: 182  KSFDLVNKGSIWTIGDGAHTSVFSDPWL 265
            K   ++  G IW +GDG+  ++++DPW+
Sbjct: 1169 KGLRVLQNGMIWRVGDGSKINIWADPWI 1196


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = +2

Query: 2    LGFKKFSDMNKPLLAKQSWRALKDKSSIWYQTFNAAYGRRGMGKEQNLPSNVSYFWRGVN 181
            LGF+     N  +LAKQ WR ++D  S+  +   A Y   G        SNVSY WR + 
Sbjct: 1054 LGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQ 1113

Query: 182  KSFDLVNKGSIWTIGDGAHTSVFSDPWL 265
            K   ++  G IW +GDG+  ++++DPW+
Sbjct: 1114 KGLRVLQNGMIWRVGDGSKINIWADPWI 1141


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/88 (39%), Positives = 46/88 (52%)
 Frame = +2

Query: 2   LGFKKFSDMNKPLLAKQSWRALKDKSSIWYQTFNAAYGRRGMGKEQNLPSNVSYFWRGVN 181
           LGF+K  D N  LLAKQ WR L++  S+  + F A Y R        L SN SY WR + 
Sbjct: 321 LGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSIL 380

Query: 182 KSFDLVNKGSIWTIGDGAHTSVFSDPWL 265
            +  L+ +G  W+I  G    V+ D WL
Sbjct: 381 AAQGLLKRGCYWSIASGTKVQVWGDSWL 408


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = +2

Query: 2    LGFKKFSDMNKPLLAKQSWRALKDKSSIWYQTFNAAYGRRGMGKEQNLPSNVSYFWRGVN 181
            LGF+     N  +LAKQ WR ++D  S+  +   A Y   G        SNVSY WR + 
Sbjct: 1050 LGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQ 1109

Query: 182  KSFDLVNKGSIWTIGDGAHTSVFSDPWL 265
            K   ++  G IW +GDG+  ++++DPW+
Sbjct: 1110 KGLRVLQNGMIWRVGDGSKINIWADPWI 1137