BLASTX nr result

ID: Coptis23_contig00027192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027192
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplasti...   113   1e-23
ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811...    96   4e-18
ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplasti...    91   7e-17
ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arab...    91   7e-17

>ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplastic [Vitis vinifera]
          Length = 293

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/70 (75%), Positives = 65/70 (92%)
 Frame = -2

Query: 211 TGKSLGLFCFNKKDADSLLERMKSMDPGMRRGSKVVAVALNKVFQLKIDGVAFRFIPDSS 32
           TGKSLGLFC  K+DA++LLE+MK MDPGMR+GSKVVAVALNKVFQLK+DGVAFR +PDS+
Sbjct: 117 TGKSLGLFCLKKEDAETLLEQMKLMDPGMRQGSKVVAVALNKVFQLKLDGVAFRLMPDST 176

Query: 31  QIKNAIKVKQ 2
           Q+KNA++V +
Sbjct: 177 QVKNALRVME 186


>ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|222843476|gb|EEE81023.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/71 (73%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
 Frame = -2

Query: 211 TGKSLGLFCFNKKDADSLLERMKSMDPGMRRG-SKVVAVALNKVFQLKIDGVAFRFIPDS 35
           TGKSLGLFCF ++DA++LLE+MKSMDPGMR+G SKVV VALNKVFQLK+DGVAFR IP+ 
Sbjct: 128 TGKSLGLFCFKQEDAEALLEQMKSMDPGMRKGGSKVVPVALNKVFQLKVDGVAFRLIPEP 187

Query: 34  SQIKNAIKVKQ 2
           SQ+KNA+  ++
Sbjct: 188 SQVKNALMERE 198


>ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811136 [Glycine max]
          Length = 253

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/70 (62%), Positives = 60/70 (85%)
 Frame = -2

Query: 211 TGKSLGLFCFNKKDADSLLERMKSMDPGMRRGSKVVAVALNKVFQLKIDGVAFRFIPDSS 32
           +GK+LGLFCFNK DA++LL ++  +DP  R+GSKVV VALNKVFQLK++GVAFR IP+ S
Sbjct: 83  SGKNLGLFCFNKDDAEALLNQVTLIDPHARQGSKVVPVALNKVFQLKVNGVAFRLIPEFS 142

Query: 31  QIKNAIKVKQ 2
           Q+KNA++ ++
Sbjct: 143 QVKNALQERE 152


>ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplastic-like [Cucumis
           sativus] gi|449496760|ref|XP_004160220.1| PREDICTED:
           protein TIC 22-like, chloroplastic-like [Cucumis
           sativus]
          Length = 301

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/64 (67%), Positives = 53/64 (82%)
 Frame = -2

Query: 205 KSLGLFCFNKKDADSLLERMKSMDPGMRRGSKVVAVALNKVFQLKIDGVAFRFIPDSSQI 26
           KSLGLFCF K DA++LL+ + +MDP  R GSKVV VALNKVFQL ++GVAFR IP+ SQ+
Sbjct: 132 KSLGLFCFKKDDAETLLQHIGTMDPSARYGSKVVPVALNKVFQLNVNGVAFRLIPECSQV 191

Query: 25  KNAI 14
           KNA+
Sbjct: 192 KNAL 195


>ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arabidopsis lyrata subsp.
           lyrata] gi|297329293|gb|EFH59712.1| hypothetical protein
           ARALYDRAFT_479887 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/71 (63%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
 Frame = -2

Query: 211 TGKSLGLFCFNKKDADSLLERMKSMDPGMRR-GSKVVAVALNKVFQLKIDGVAFRFIPDS 35
           +GKSLGL    ++DA++LL++MKSMDP MR+ GSKVVA+AL+KVFQLK++GVAFR IP+S
Sbjct: 143 SGKSLGLLFCKEEDAETLLKQMKSMDPRMRKEGSKVVALALSKVFQLKVNGVAFRLIPES 202

Query: 34  SQIKNAIKVKQ 2
           +Q+KNA+K ++
Sbjct: 203 TQVKNALKERK 213


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