BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027185
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...    83   2e-14
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    83   2e-14
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    73   3e-11
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    72   5e-11

>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
 Frame = +2

Query: 11  CFDVEKELFRTMPLPPIPVGRKERRVDYLGASRDHLYLIQRFDY-GNQLYILDMERDYSC 187
           CFDV++E  R MP+PPIP     RRV Y G S  HL LI+ + +   Q  + ++ +DYS 
Sbjct: 168 CFDVDQEQIREMPMPPIPDDWYRRRVIYFGESGGHLNLIEIYHHAATQFNVCELAKDYSG 227

Query: 188 WKVRYEMNLTTITTAYPEMIRHYLATLDWNYYAFSV-LLVQGETE 319
           W V+Y + L  +  A+PEMI+        NYYA+ +  +V+GE++
Sbjct: 228 WFVKYRIELEEVIIAFPEMIKTQFEPTVLNYYAYEIWCIVRGESD 272


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   LCLCFDVEKELFRTMPLPPIPVGRKERRVDYLGASRDHLYLIQRFDYGNQLY-ILDMERD 178
           L L FD+E+E   TMP+PPIP GR ERR+ Y G S  HL LI+ +      + ++ ME D
Sbjct: 240 LALRFDIEQERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEIYGPITTCFDVMRMESD 299

Query: 179 YSCWKVRYEMNLTTITTAYPEMIRHYLATLDWNYYAFSVL 298
           YS W VRY ++L+ I +++P M R+ +   D + Y FS+L
Sbjct: 300 YSGWSVRYRVDLSRIASSFPSMARNNVQ--DIHRYLFSIL 337


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = +2

Query: 14  FDVEKELFRTMPLPPIPVGRKERRVDYLGASRDHLYLIQRFDYGN-QLYILDMERDYSCW 190
           FD+++E   +MP  P      +RR  Y G S  HL+LI+ +     Q  + +ME+DYS W
Sbjct: 231 FDMDRECISSMPKLPFSYEWGKRRFRYFGESDGHLHLIEIYGLRTTQFNVYEMEKDYSFW 290

Query: 191 KVRYEMNLTTITTAYPEMIRHYLATLDWNYYAFSVL 298
           ++RY + L  +  A+PEM+R YL   D NYYAF VL
Sbjct: 291 RIRYRVQLDHVVAAFPEMVRSYLDAGDSNYYAFVVL 326


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +2

Query: 8   LCFDVEKELFRTMPLPPIPVGRKERRVDYLGASRDHLYLIQRFDYG-NQLYILDMERDYS 184
           L FD+ +EL R MP+PP+P    ER +   G S  HL+L++ ++    Q  + +MERD+S
Sbjct: 221 LYFDLNEELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEIYESSTTQFNVYEMERDHS 280

Query: 185 CWKVRYEMNLTTITTAYPEMIRHYLATLDWNYYAFSVLLV 304
            W V++ ++L  +  A+P +I  Y    D+  Y+FSVL +
Sbjct: 281 GWFVKFRVDLNGVALAFPGIIEGYHEEYDY-MYSFSVLCI 319


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = +2

Query: 8   LCFDVEKELFRTMPLPPI-PVGRKERRVDYLGASRDHLYLIQRFD-YGNQLYILDMERDY 181
           L F +++    TMP PP  P G  +RR+ + G S  HL++I+ +     Q  + +MERDY
Sbjct: 247 LYFGIDEGRIDTMPPPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEMERDY 306

Query: 182 SCWKVRYEMNLTTITTAYPEMIRHYLATLDWNYYAFSVL-LVQG 310
           S W VR+ ++L  +  A+PE+ ++YL   D  YYA++VL L++G
Sbjct: 307 SNWGVRFSVDLDKVIAAFPEITQNYLDAHDLYYYAYNVLCLIRG 350