BLASTX nr result

ID: Coptis23_contig00027184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027184
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26306.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002517072.1| conserved hypothetical protein [Ricinus comm...   120   2e-25
ref|NP_001031641.1| epidermal patterning factor-like protein 4 [...   117   2e-24
ref|XP_002870291.1| hypothetical protein ARALYDRAFT_493427 [Arab...   117   2e-24
ref|NP_188921.1| epidermal patterning factor-like protein 5 [Ara...   112   5e-23

>emb|CBI26306.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  127 bits (320), Expect = 1e-27
 Identities = 60/82 (73%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
 Frame = +3

Query: 216 GIVGNE-EDVKRGGGPEVMEWVVLNRRRLGGPGSSPPTCRFKCGRCRPCKPVRVPIQPGV 392
           G+VG E E+ KRG G    E V L ++RLGGPGSSPPTCR KCGRC PCK V VPIQPG 
Sbjct: 65  GLVGQEREERKRGSGSVAFERV-LTQKRLGGPGSSPPTCRSKCGRCAPCKAVHVPIQPGF 123

Query: 393 SVPLEYYPEAWRCKCHNKLFMP 458
           S+PLEYYPEAWRCKC NKLFMP
Sbjct: 124 SIPLEYYPEAWRCKCGNKLFMP 145


>ref|XP_002517072.1| conserved hypothetical protein [Ricinus communis]
           gi|223543707|gb|EEF45235.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score =  120 bits (301), Expect = 2e-25
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = +3

Query: 282 LNRRRLGGPGSSPPTCRFKCGRCRPCKPVRVPIQPGVSVPLEYYPEAWRCKCHNKLFMP 458
           L+++RLGGPGSSPPTCR KCGRC PCKPV VPIQPG+S+PLEYYPEAWRCKC NKLFMP
Sbjct: 60  LSQKRLGGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 118


>ref|NP_001031641.1| epidermal patterning factor-like protein 4 [Arabidopsis thaliana]
           gi|122209356|sp|Q2V3I3.1|EPFL4_ARATH RecName:
           Full=EPIDERMAL PATTERNING FACTOR-like protein 4;
           Short=EPF-like protein 4; Flags: Precursor
           gi|98961833|gb|ABF59246.1| unknown protein [Arabidopsis
           thaliana] gi|332658088|gb|AEE83488.1| epidermal
           patterning factor-like protein 4 [Arabidopsis thaliana]
          Length = 109

 Score =  117 bits (293), Expect = 2e-24
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = +3

Query: 255 GPEVMEWVVLNRRRLGGPGSSPPTCRFKCGRCRPCKPVRVPIQPGVSVPLEYYPEAWRCK 434
           G ++    + + +R GGPGSSPPTCR KCG+C+PCKPV VPIQPG+S+PLEYYPEAWRCK
Sbjct: 42  GSDLPGGFIRSNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCK 101

Query: 435 CHNKLFMP 458
           C NKLFMP
Sbjct: 102 CGNKLFMP 109


>ref|XP_002870291.1| hypothetical protein ARALYDRAFT_493427 [Arabidopsis lyrata subsp.
           lyrata] gi|297316127|gb|EFH46550.1| hypothetical protein
           ARALYDRAFT_493427 [Arabidopsis lyrata subsp. lyrata]
          Length = 110

 Score =  117 bits (293), Expect = 2e-24
 Identities = 49/68 (72%), Positives = 57/68 (83%)
 Frame = +3

Query: 255 GPEVMEWVVLNRRRLGGPGSSPPTCRFKCGRCRPCKPVRVPIQPGVSVPLEYYPEAWRCK 434
           G ++    V N +R GGPGSSPPTCR KCG+C+PCKPV VPIQPG+S+PLEYYPEAWRCK
Sbjct: 43  GSDLPGGFVENNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCK 102

Query: 435 CHNKLFMP 458
           C +KLFMP
Sbjct: 103 CGSKLFMP 110


>ref|NP_188921.1| epidermal patterning factor-like protein 5 [Arabidopsis thaliana]
           gi|75274229|sp|Q9LUH9.1|EPFL5_ARATH RecName:
           Full=EPIDERMAL PATTERNING FACTOR-like protein 5;
           Short=EPF-like protein 5; Flags: Precursor
           gi|9279700|dbj|BAB01257.1| unnamed protein product
           [Arabidopsis thaliana] gi|46931210|gb|AAT06409.1|
           At3g22820 [Arabidopsis thaliana]
           gi|48310314|gb|AAT41796.1| At3g22820 [Arabidopsis
           thaliana] gi|332643159|gb|AEE76680.1| epidermal
           patterning factor-like protein 5 [Arabidopsis thaliana]
          Length = 107

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/86 (56%), Positives = 64/86 (74%)
 Frame = +3

Query: 201 QQLNFGIVGNEEDVKRGGGPEVMEWVVLNRRRLGGPGSSPPTCRFKCGRCRPCKPVRVPI 380
           Q+ + G+   ++++ R G P      +++++RLGGPGS PP CR KCG+C PCK V VPI
Sbjct: 26  QRPSGGLGQGKKEIARSGLPGQ----IVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPI 81

Query: 381 QPGVSVPLEYYPEAWRCKCHNKLFMP 458
           QPG+ +PLEYYPEAWRCKC NKLFMP
Sbjct: 82  QPGLIMPLEYYPEAWRCKCGNKLFMP 107


Top