BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027164
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18084.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   120   9e-26
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat...   119   2e-25
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t...   118   6e-25
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -2

Query: 253 VLLSNIFSVTSRWDDAENLRLIMNERGLQKTPGCSWIEMDGVVHEFRVGDQSHPLSAKIY 74
           VLLSNI+S   +WD+A  +RL MNE+ +QK PGCSWIE+DG+VHEF VGD+ HPLS KIY
Sbjct: 331 VLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIY 390

Query: 73  MKLDELSTELKPLGYKPETDFVLF 2
            KLDEL+ ++K  GY P TDFVLF
Sbjct: 391 AKLDELTKKMKVAGYVPTTDFVLF 414


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -2

Query: 253 VLLSNIFSVTSRWDDAENLRLIMNERGLQKTPGCSWIEMDGVVHEFRVGDQSHPLSAKIY 74
           VLLSNI+S   +WD+A  +RL MNE+ +QK PGCSWIE+DG+VHEF VGD+ HPLS KIY
Sbjct: 521 VLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIY 580

Query: 73  MKLDELSTELKPLGYKPETDFVLF 2
            KLDEL+ ++K  GY P TDFVLF
Sbjct: 581 AKLDELTKKMKVAGYVPTTDFVLF 604


>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = -2

Query: 253 VLLSNIFSVTSRWDDAENLRLIMNERGLQKTPGCSWIEMDGVVHEFRVGDQSHPLSAKIY 74
           VLLSNI+S + RWD+AE +R  +N++G+QK PGCSW+E+DGVVHEF VGD SHPLS KIY
Sbjct: 511 VLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIY 570

Query: 73  MKLDELSTELKPLGYKPETDFVLF 2
            KL+ L  +L+  GY P T+FVLF
Sbjct: 571 EKLESLFKDLREAGYNPTTEFVLF 594


>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 678

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/84 (64%), Positives = 66/84 (78%)
 Frame = -2

Query: 253 VLLSNIFSVTSRWDDAENLRLIMNERGLQKTPGCSWIEMDGVVHEFRVGDQSHPLSAKIY 74
           VLLSNI+S + RWD+AE +R  +NE+G+QK PG SW+E+DGVVHEF VGD SHPLS KIY
Sbjct: 513 VLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIY 572

Query: 73  MKLDELSTELKPLGYKPETDFVLF 2
            KL+ L  +LK  GY P T+FVLF
Sbjct: 573 EKLESLFKDLKEAGYNPTTEFVLF 596


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = -2

Query: 253 VLLSNIFSVTSRWDDAENLRLIMNERGLQKTPGCSWIEMDGVVHEFRVGDQSHPLSAKIY 74
           VLLSNI+S + +W+DA  +R IM+ERG++K PG SWIE+DGVVHEF VGD SHPLS KIY
Sbjct: 454 VLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIY 513

Query: 73  MKLDELSTELKPLGYKPETDFVLF 2
            KL EL  +LK  GY P TD+VLF
Sbjct: 514 AKLGELVKDLKASGYVPTTDYVLF 537