BLASTX nr result

ID: Coptis23_contig00027153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027153
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   FSHLKELALVVFLSSDFDLLSIASVLNASPCLQKFHLSL-QNGGFRVPRVERDYSKQLYY 178
           F  LK+L L+++   D DLL++  +LNASP L+   L + + G  R     R+YS+  + 
Sbjct: 299 FISLKQLDLLIWPFIDSDLLTVIYLLNASPLLEILQLKIGRQGEGRSNGERREYSRHTHS 358

Query: 179 QLKEVEISGFHDRCDSFELAIHLLNSAIGLER 274
            LKEV++ GF D+ ++ ELAI+LL + I LER
Sbjct: 359 HLKEVKMEGFRDKWNAMELAIYLLKNTIALER 390


>ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|222873948|gb|EEF11079.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   FSHLKELALVVFLSSDFDLLSIASVLNASPCLQKFHLSL-QNGGFRVPRVERDYSKQLYY 178
           F  LK+L L+++   D DLL++  +LNASP L+   L +   G  R     R+YS+  + 
Sbjct: 11  FISLKQLDLLIWPFIDSDLLTVIYLLNASPLLEILQLKIGHQGEGRSNGERREYSRHTHS 70

Query: 179 QLKEVEISGFHDRCDSFELAIHLLNSAIGLER 274
            LKEV++ GF D+ ++ ELAI+LL + I LER
Sbjct: 71  HLKEVKMEGFRDKWNAMELAIYLLKNTIALER 102


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