BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027145
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68203.1| retrotransposon ribonuclease H [Helianthus annuus]     61   1e-10
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]    57   2e-10
emb|CAX68204.1| retrotransposon ribonuclease H [Helianthus annuus]     59   4e-10
emb|CAX68202.1| retrotransposon ribonuclease H [Helianthus annuus]     59   4e-10
emb|CAX68205.1| retrotransposon ribonuclease H [Helianthus annuus]     62   4e-08

>emb|CAX68203.1| retrotransposon ribonuclease H [Helianthus annuus]
          Length = 207

 Score = 60.8 bits (146), Expect(2) = 1e-10
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -1

Query: 314 VLEGYSNASWITRATHINKSPSGWISTIARGAVSWASKKQT 192
           +LEGYS+ASWI R T+ +KS SGWI T+A GAVSWASKKQT
Sbjct: 61  ILEGYSDASWIDR-TNDSKSTSGWIFTLAGGAVSWASKKQT 100



 Score = 30.0 bits (66), Expect(2) = 1e-10
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 196 RHPCISHSTIESEFIVLAAATGDA 125
           +  CI+HST+E+E I LAAA  +A
Sbjct: 98  KQTCIAHSTMEAELIALAAAGKEA 121


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score = 57.4 bits (137), Expect(2) = 2e-10
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -1

Query: 323  FPAVLEGYSNASWITRATHINKSPSGWISTIARGAVSWASKKQT 192
            FPA++EGYS+ASWI+     N S +GW+ T+  GAVSW SKKQT
Sbjct: 944  FPAIIEGYSDASWISSVGD-NLSTTGWVFTLGGGAVSWGSKKQT 986



 Score = 32.3 bits (72), Expect(2) = 2e-10
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 196  RHPCISHSTIESEFIVLAAATGDA 125
            +  CISHST+E+EFI LAA   +A
Sbjct: 984  KQTCISHSTMEAEFIALAATRKEA 1007


>emb|CAX68204.1| retrotransposon ribonuclease H [Helianthus annuus]
          Length = 207

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -1

Query: 314 VLEGYSNASWITRATHINKSPSGWISTIARGAVSWASKKQT 192
           +LEGYS+ASWI R    +KS SGWI T+A GAVSWASKKQT
Sbjct: 61  ILEGYSDASWIDRIND-SKSTSGWIFTLAGGAVSWASKKQT 100



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 196 RHPCISHSTIESEFIVLAAATGDA 125
           +  CI+HST+E+E I LAAA  +A
Sbjct: 98  KQTCIAHSTMEAELIALAAAGKEA 121


>emb|CAX68202.1| retrotransposon ribonuclease H [Helianthus annuus]
          Length = 207

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -1

Query: 314 VLEGYSNASWITRATHINKSPSGWISTIARGAVSWASKKQT 192
           +LEGYS+ASWI R    +KS SGWI T+A GAVSWASKKQT
Sbjct: 61  ILEGYSDASWIDRIND-SKSTSGWIFTLAGGAVSWASKKQT 100



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 196 RHPCISHSTIESEFIVLAAATGDA 125
           +  CI+HST+E+E I LAAA  +A
Sbjct: 98  KQTCIAHSTMEAELIALAAAGKEA 121


>emb|CAX68205.1| retrotransposon ribonuclease H [Helianthus annuus]
          Length = 207

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -1

Query: 323 FPAVLEGYSNASWITRATHINKSPSGWISTIARGAVSWASKKQT 192
           F  +LEGYS+ASWI R T+ +KS SGWI T+A GAVSWASKKQT
Sbjct: 58  FSRILEGYSDASWIDR-TNDSKSTSGWIFTLAGGAVSWASKKQT 100