BLASTX nr result

ID: Coptis23_contig00027132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027132
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    60   3e-07
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    59   4e-07
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    57   2e-06
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    55   6e-06

>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
 Frame = -1

Query: 483 QTWAHMQFK-PKGLNRCSWDPPLKNRVKLNADGSLSSRSTGHGGTIKDKFGQVVVAYTGS 307
           +TW+ +     + +  C W  P    +KLN DGS+ S + G GG  +D  G  +  +   
Sbjct: 149 ETWSDLLGPVARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSK 208

Query: 306 G*MLSVLFQELLAIEVGLKRCLNEGLLKVEVDSDSLRVVNVINKQESLLG 157
                +   EL AI  GL   LN  +  + V+SDSL VVN IN+Q+   G
Sbjct: 209 ASGHDIFLVELWAIWRGLVLALNLHIQVLWVESDSLSVVNTINRQQPYSG 258


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/94 (34%), Positives = 47/94 (50%)
 Frame = -1

Query: 438 CSWDPPLKNRVKLNADGSLSSRSTGHGGTIKDKFGQVVVAYTGSG*MLSVLFQELLAIEV 259
           C W  P    +KLN DGS+  +  G GG ++D  G  + A+     +  +   EL AI  
Sbjct: 272 CIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWR 331

Query: 258 GLKRCLNEGLLKVEVDSDSLRVVNVINKQESLLG 157
           GL   L  G+  + V+SDS+  V  IN+ +S  G
Sbjct: 332 GLVLALGLGIKVIWVESDSMSAVKTINRVQSHSG 365


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 31/95 (32%), Positives = 48/95 (50%)
 Frame = -1

Query: 453 KGLNRCSWDPPLKNRVKLNADGSLSSRSTGHGGTIKDKFGQVVVAYTGSG*MLSVLFQEL 274
           + +  C W  P     KLN DGS+ S +   GG ++D  G+ + A+        V   EL
Sbjct: 301 RSIRWCEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAEL 360

Query: 273 LAIEVGLKRCLNEGLLKVEVDSDSLRVVNVINKQE 169
            AI  GL   L  G+  + V+SDS+ VV  +N+++
Sbjct: 361 WAIWRGLVLSLGLGIKAIWVESDSMSVVRTVNRKQ 395


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
 Frame = -1

Query: 435 SWDPPLKNRVKLNADGSLSSRSTGHGGTIKDKFGQVVVAYTGSG*MLSVLFQELLAIEVG 256
           SW+ P     KLN DGS+   + G GG  +D  G  + AY        +   EL AI  G
Sbjct: 154 SWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRG 213

Query: 255 LKRCLNEGLLKVEVDSDSLRVVNVINKQE-------SLLGTVW 148
           L      G+  + V+SDS+ VV  IN+++       S L  +W
Sbjct: 214 LVLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIW 256


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
 Frame = -1

Query: 435 SWDPPLKNRVKLNADGSLSSRSTGHGGTIKDKFGQVVVAYTGSG*MLSVLFQELLAIEVG 256
           SW+ P     KLN DGS+   + G GG  +D  G  + AY        +   EL AI  G
Sbjct: 267 SWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRG 326

Query: 255 LKRCLNEGLLKVEVDSDSLRVVNVINKQE-------SLLGTVW 148
           L      G+  + V+SDS+  V  IN+++       S L  +W
Sbjct: 327 LVLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIW 369


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