BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027115
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              157   6e-37
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   156   1e-36
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   153   1e-35
ref|XP_002865608.1| binding protein [Arabidopsis lyrata subsp. l...   142   4e-32
ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   138   5e-31

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  157 bits (398), Expect = 6e-37
 Identities = 78/119 (65%), Positives = 98/119 (82%)
 Frame = -3

Query: 358 MAKPNSWPSHIETFVDISRPPNEQIASRDAIASLLKNDLLTFQALVKEMSLYLTTTDHII 179
           MA+ +    +IE++VD SR   +Q AS DAIA LLKND+LT + LV EM +YLTTTD+II
Sbjct: 1   MAQLSQLTQYIESYVDSSRSSTQQAASVDAIAYLLKNDILTLETLVTEMGMYLTTTDNII 60

Query: 178 RGRGILLLGEVLTSLATKPLDNTTLHTLVSFFTDKLADWQALRGGLIGCLALLRRKSNV 2
           R RGILLL E+LT LA+KPLDN T+H+L+SFFTD+LADW+ALRG LIGCLAL++RKSN+
Sbjct: 61  RTRGILLLAELLTRLASKPLDNVTIHSLISFFTDRLADWRALRGALIGCLALMKRKSNM 119


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
           communis] gi|223544868|gb|EEF46383.1| DNA
           repair/transcription protein met18/mms19, putative
           [Ricinus communis]
          Length = 1174

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/118 (63%), Positives = 97/118 (82%)
 Frame = -3

Query: 358 MAKPNSWPSHIETFVDISRPPNEQIASRDAIASLLKNDLLTFQALVKEMSLYLTTTDHII 179
           MA+P     +IE++VD SR  ++Q AS DAI  LLKND +T  +LVKEM +YLTTTD II
Sbjct: 1   MAEPTQLTQYIESYVDASRSLSQQAASLDAIVLLLKNDAVTIGSLVKEMEMYLTTTDDII 60

Query: 178 RGRGILLLGEVLTSLATKPLDNTTLHTLVSFFTDKLADWQALRGGLIGCLALLRRKSN 5
           R RGILLLGE L+ L++KPLDNTT+H+L++FFT++LADW+ALRG L+GCLAL+RR+SN
Sbjct: 61  RARGILLLGEALSHLSSKPLDNTTIHSLIAFFTERLADWRALRGALVGCLALIRRRSN 118


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Cucumis sativus]
          Length = 1147

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/110 (62%), Positives = 96/110 (87%)
 Frame = -3

Query: 331 HIETFVDISRPPNEQIASRDAIASLLKNDLLTFQALVKEMSLYLTTTDHIIRGRGILLLG 152
           ++E+FVD+SR P++Q  S + I SL+KN++LT + LV+EM +YLT TD+IIRGRGILLLG
Sbjct: 10  YVESFVDVSRTPSQQATSLETITSLVKNNVLTIETLVREMGMYLTITDNIIRGRGILLLG 69

Query: 151 EVLTSLATKPLDNTTLHTLVSFFTDKLADWQALRGGLIGCLALLRRKSNV 2
           E+L  LA+KPLD+ T+H+L++FFT++LADW+ALRG L+GCLAL+RRK+NV
Sbjct: 70  ELLACLASKPLDSATIHSLIAFFTERLADWKALRGALVGCLALMRRKTNV 119


>ref|XP_002865608.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311443|gb|EFH41867.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1127

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/116 (57%), Positives = 89/116 (76%)
 Frame = -3

Query: 358 MAKPNSWPSHIETFVDISRPPNEQIASRDAIASLLKNDLLTFQALVKEMSLYLTTTDHII 179
           M +PN    ++ETFVDI+R P +Q  S  AIAS L+ND L+   LV+EM +YLTTTD+++
Sbjct: 1   MVEPNQLTQYLETFVDITRSPTQQDDSLKAIASSLENDSLSINQLVREMEMYLTTTDNVV 60

Query: 178 RGRGILLLGEVLTSLATKPLDNTTLHTLVSFFTDKLADWQALRGGLIGCLALLRRK 11
           R RGILLL E+L  L  KPL++T +HTLV FFT+KLADW+A+ G L+GCLAL++RK
Sbjct: 61  RARGILLLAEILDCLKAKPLNDTIVHTLVGFFTEKLADWRAVHGALVGCLALMKRK 116


>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/119 (53%), Positives = 92/119 (77%)
 Frame = -3

Query: 358 MAKPNSWPSHIETFVDISRPPNEQIASRDAIASLLKNDLLTFQALVKEMSLYLTTTDHII 179
           MA+      HIE++VD S  P +Q +S +A+ASL+  D L  +ALV+E+ +YLTTTD+++
Sbjct: 1   MAETTQLTRHIESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVV 60

Query: 178 RGRGILLLGEVLTSLATKPLDNTTLHTLVSFFTDKLADWQALRGGLIGCLALLRRKSNV 2
           R RGILLL EV+T + +KPL++ T+H+LV FF D+LADW+A++G L+GCLAL+RRKS V
Sbjct: 61  RARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVV 119