BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027101
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]    90   2e-16
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...    89   4e-16
ref|XP_002275165.2| PREDICTED: translation initiation factor eIF...    83   2e-14
ref|XP_004138224.1| PREDICTED: translation initiation factor eIF...    79   3e-13
ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 66/143 (46%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
 Frame = -3

Query: 456 SFLPQNSNTHPIFPNMDTRRVSRTVIDPKVRQVGFITP-------TSGPP----PPLDRT 310
           S L   ++ H    +MD RR +R VIDPKVRQVGF  P        SGPP    PP+   
Sbjct: 51  STLKTLTHIHETPLHMDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV--A 108

Query: 309 QSGPASNSLPPVTIPPRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSEYFLGA 133
            + P  NSL PV IPP RHASDNL S  P   P  PLR+    + +PVGSY  SE+F G 
Sbjct: 109 DNSPTGNSLSPVMIPPPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHGT 164

Query: 132 SEISTESMIKFYDDDG-GEVSED 67
           S  ++     FY   G GE SED
Sbjct: 165 SPTAS-----FYSKVGDGEFSED 182


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 63/128 (49%), Positives = 72/128 (56%), Gaps = 13/128 (10%)
 Frame = -3

Query: 411 MDTRRVSRTVIDPKVRQVGFITP-------TSGPP----PPLDRTQSGPASNSLPPVTIP 265
           MD RR +R VIDPKVRQVGF  P        SGPP    PP+    + P  NSL PV IP
Sbjct: 1   MDPRRGARVVIDPKVRQVGFFAPGASPGRTQSGPPESSSPPV--ADNSPTGNSLSPVMIP 58

Query: 264 PRRHASDNLTSV-PVNVPMSPLRKISINENMPVGSYESSEYFLGASEISTESMIKFYDDD 88
           P RHASDNL S  P   P  PLR+    + +PVGSY  SE+F G S  ++     FY   
Sbjct: 59  PPRHASDNLLSARPALYP--PLRR--PGDTIPVGSYNPSEFFHGTSPTAS-----FYSKV 109

Query: 87  G-GEVSED 67
           G GE SED
Sbjct: 110 GDGEFSED 117


>ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed
           protein product [Vitis vinifera]
          Length = 649

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 56/122 (45%), Positives = 69/122 (56%), Gaps = 15/122 (12%)
 Frame = -3

Query: 411 MDTRRVSRTVIDPKVRQVGFITP-------TSGP-----PPPLDRTQSGPASNSLPPVTI 268
           M+ RR SR  IDPKVRQVGF  P        SGP      PP+  +   P  NSL PV I
Sbjct: 1   MEARRTSRIPIDPKVRQVGFFAPGALRDRSQSGPLGFSSSPPV--SNISPTGNSLSPVMI 58

Query: 267 PPRRHASDN-LTSVPVNVPM--SPLRKISINENMPVGSYESSEYFLGASEISTESMIKFY 97
           PP RHASDN + S P+ VP+  S LR  ++ + M VGSY++SE  LG S  S     +F 
Sbjct: 59  PPPRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSASSRIGDGEFS 118

Query: 96  DD 91
           +D
Sbjct: 119 ED 120


>ref|XP_004138224.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Cucumis sativus] gi|449477110|ref|XP_004154932.1|
           PREDICTED: translation initiation factor eIF-2B subunit
           delta-like [Cucumis sativus]
          Length = 651

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 60/148 (40%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
 Frame = -3

Query: 411 MDTRRVSRTVIDPKVRQVGFIT---------PTSGPPPPLDRTQS-GPASNSLPPVTIPP 262
           MD RR SR +++PKVRQVGF T           SGPP  L   QS  P +NSL PV IPP
Sbjct: 1   MDARRGSR-IVNPKVRQVGFFTLDAPNSPDRSLSGPPNCLPSQQSLSPPTNSLSPVMIPP 59

Query: 261 RRHASDNLTSVPVNVPM-SPLRKISINENMPVGSYESSEYFLGASEISTESMIKFYDDDG 85
            RH SDNL S    +P+ +P    +  + +PVGSY  SE  L  S +++ S      D+ 
Sbjct: 60  PRHLSDNLASRSAVLPVPAPANWRNSTDQIPVGSYNPSETLLATSPMASPS--SRTGDEE 117

Query: 84  GEVSEDNMFSDVKFGTGSNYPVASFTTV 1
            ++SED+  S     +GS    +SF  V
Sbjct: 118 LDMSEDSSNSVWHRRSGSGKIASSFPGV 145


>ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|222859236|gb|EEE96783.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 58/136 (42%), Positives = 69/136 (50%), Gaps = 18/136 (13%)
 Frame = -3

Query: 411 MDTRRVSRTVIDPKVRQVGFITPTSGPPPPLDRTQS------------GPASNSLPPVTI 268
           MD RR + TV  P+VRQVGF TP + P  P  RTQS             PASNSL PV I
Sbjct: 1   MDARRATTTV--PRVRQVGFFTPNAPPAQP-SRTQSFPRDSSSPPLSNSPASNSLSPVMI 57

Query: 267 PPRRHASDNL-----TSVPVNVPMSPLRKISINENMPVGSYESSEYFLGAS-EISTESMI 106
           PP RH SDNL     + +PV  P +  R I  +    VGSY  SE  LG+S  +++ S  
Sbjct: 58  PPPRHLSDNLVHRATSPLPVPEPPAFRRPIRSHHVAVVGSYNPSESLLGSSPPLASPSSR 117

Query: 105 KFYDDDGGEVSEDNMF 58
              D D  E S    F
Sbjct: 118 VIGDGDFSEESSAGWF 133