BLASTX nr result

ID: Coptis23_contig00027081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027081
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309409.1| predicted protein [Populus trichocarpa] gi|2...   172   5e-41
ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620...   172   8e-41
emb|CBI30346.3| unnamed protein product [Vitis vinifera]              172   8e-41
emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]   171   1e-40
ref|XP_004136496.1| PREDICTED: uncharacterized protein At5g41620...   165   7e-39

>ref|XP_002309409.1| predicted protein [Populus trichocarpa] gi|222855385|gb|EEE92932.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  172 bits (437), Expect = 5e-41
 Identities = 106/201 (52%), Positives = 132/201 (65%), Gaps = 7/201 (3%)
 Frame = -3

Query: 582 MPRHHRNS-LENLINGKCKIRKRGCXXXXXXXXSLLQPNYKLKRALLISKRGGSSTPVPR 406
           MPR   ++ +E L+ GK  IRKR C        S++Q NY+ KRA+L+ KRGGSSTPVP 
Sbjct: 1   MPRQKGSATMEELLPGK--IRKRVCSSSASSSSSIIQ-NYRFKRAILVGKRGGSSTPVPT 57

Query: 405 W-MMSSKSPASVFKVPESPNHHPLMYNGK----QGPVSARKLAASLWEMNEMNSPRFKDN 241
           W +M  ++P+S  +  ES    P   NGK    Q PVSARKLAA+LWEMNEM SP+ K+ 
Sbjct: 58  WKLMGKRTPSSTLRALESS---PKSLNGKAKQQQAPVSARKLAATLWEMNEMPSPQMKEE 114

Query: 240 S-GLKRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERVERSGIGGSHYGRNSMYSQKV 64
               +R++KE R    R V SG LP HLSDPSHSPVSER++RSG G  H  R S  SQK+
Sbjct: 115 IVEERRLRKEGRGRERRPVHSGSLPPHLSDPSHSPVSERIDRSGTGSCH-RRTSSISQKL 173

Query: 63  RVPGRKIGGIDSISNASLMEI 1
           R+  + IG  DS+SNASLMEI
Sbjct: 174 RLMDQSIGAFDSVSNASLMEI 194


>ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620-like [Vitis vinifera]
          Length = 693

 Score =  172 bits (435), Expect = 8e-41
 Identities = 106/197 (53%), Positives = 131/197 (66%), Gaps = 3/197 (1%)
 Frame = -3

Query: 582 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXSLLQPNYKLKRALLISKRGGSSTPVPRW 403
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 402 -MMSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 232
            +M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 231 KRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERVERSGIGGSHYGRNSMYSQKVRVPG 52
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 51  RKIGGIDSISNASLMEI 1
             +G +DS S+ASLMEI
Sbjct: 171 HNVGVMDSFSSASLMEI 187


>emb|CBI30346.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  172 bits (435), Expect = 8e-41
 Identities = 106/197 (53%), Positives = 131/197 (66%), Gaps = 3/197 (1%)
 Frame = -3

Query: 582 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXSLLQPNYKLKRALLISKRGGSSTPVPRW 403
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 402 -MMSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 232
            +M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 231 KRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERVERSGIGGSHYGRNSMYSQKVRVPG 52
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 51  RKIGGIDSISNASLMEI 1
             +G +DS S+ASLMEI
Sbjct: 171 HNVGVMDSFSSASLMEI 187


>emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]
          Length = 577

 Score =  171 bits (434), Expect = 1e-40
 Identities = 106/197 (53%), Positives = 131/197 (66%), Gaps = 3/197 (1%)
 Frame = -3

Query: 582 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXSLLQPNYKLKRALLISKRGGSSTPVPRW 403
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 402 -MMSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 232
            +M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 231 KRVKKERRRSVARSVQSGYLPQHLSDPSHSPVSERVERSGIGGSHYGRNSMYSQKVRVPG 52
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 51  RKIGGIDSISNASLMEI 1
             +G +DS S+ASLMEI
Sbjct: 171 HNVGVMDSXSSASLMEI 187


>ref|XP_004136496.1| PREDICTED: uncharacterized protein At5g41620-like [Cucumis sativus]
          Length = 668

 Score =  165 bits (418), Expect = 7e-39
 Identities = 103/204 (50%), Positives = 126/204 (61%), Gaps = 10/204 (4%)
 Frame = -3

Query: 582 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXSLLQPNYKLKRALLISKRGGSSTPVPRW 403
           MPR  +N    LI GK  IRKRGC        S+L  NY+ KRA+L+ KR GSSTP+P W
Sbjct: 1   MPR--QNLAAELIPGK--IRKRGCSSSASSSSSILH-NYRFKRAILVGKRAGSSTPLPSW 55

Query: 402 MMSS---KSPASVFKVPESPNHHPLMYNG---KQGPVSARKLAASLWEMNEMNSPRFKDN 241
            + S   +SPAS F+  ESPN+          KQ PVSARKLAA+LWEMNE+ S R K++
Sbjct: 56  RLMSSRSRSPASAFRSTESPNYELYQCGSGRSKQAPVSARKLAATLWEMNELPSTRVKES 115

Query: 240 SGLKRVKKER----RRSVARSVQSGYLPQHLSDPSHSPVSERVERSGIGGSHYGRNSMYS 73
             L   K  +    R    RSV SG LP HLSDPSHSPVSER +RSG  GS   R    S
Sbjct: 116 LALDERKSRKEMKAREKTTRSVHSGSLPPHLSDPSHSPVSERGDRSGT-GSRCRRTPSMS 174

Query: 72  QKVRVPGRKIGGIDSISNASLMEI 1
           Q++++    +G +DS+SNASLMEI
Sbjct: 175 QRLKLADHGVGVLDSVSNASLMEI 198


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