BLASTX nr result

ID: Coptis23_contig00027073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027073
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313683.1| predicted protein [Populus trichocarpa] gi|3...   400   e-110
sp|B9FSH5.1|SYAP_ORYSJ RecName: Full=Probable alanine--tRNA liga...   397   e-108
sp|B8B4H5.1|SYAP_ORYSI RecName: Full=Probable alanine--tRNA liga...   397   e-108
ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, ...   394   e-107
dbj|BAJ94736.1| predicted protein [Hordeum vulgare subsp. vulgare]    390   e-107

>ref|XP_002313683.1| predicted protein [Populus trichocarpa]
           gi|313471500|sp|B9HQZ6.1|SYAP_POPTR RecName:
           Full=Probable alanine--tRNA ligase, chloroplastic;
           AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
           gi|222850091|gb|EEE87638.1| predicted protein [Populus
           trichocarpa]
          Length = 994

 Score =  400 bits (1029), Expect = e-110
 Identities = 186/215 (86%), Positives = 200/215 (93%)
 Frame = +1

Query: 1   RHHTFFEMLGNFSFGDYFKREAIKWAWELSTKEFALPSERLWISVFEDDDEAFSIWRDEV 180
           RHHTFFEMLGNFSFGDYFK+EAIKWAWELSTKEF LP++RLW+SV+EDDDEAF IW DEV
Sbjct: 176 RHHTFFEMLGNFSFGDYFKKEAIKWAWELSTKEFGLPADRLWVSVYEDDDEAFEIWHDEV 235

Query: 181 GVPVERIKRMGEDDNFWTSGVTGPCGPCSEIYYDFHPERGNSDADLDDDSRFIEFYNLVF 360
           GVPVERIKRMGE+DNFWTSG TGPCGPCSE+YYDFHPERG  + DL DDSRFIEFYNLVF
Sbjct: 236 GVPVERIKRMGEEDNFWTSGATGPCGPCSELYYDFHPERGYKNTDLGDDSRFIEFYNLVF 295

Query: 361 MQYNKMDDGSLEPLKQKNIDTGLGLERMARILQKVPTNYETDLIYPIIEKVADLAMVSYA 540
           MQYNKMDDGSLEPLKQKNIDTGLGLER+ARILQKVP NYETDLIYPIIEK A+LA +SYA
Sbjct: 296 MQYNKMDDGSLEPLKQKNIDTGLGLERLARILQKVPNNYETDLIYPIIEKAAELANISYA 355

Query: 541 QADDHIKTSLKIIGDHMRAIVYLISDGVVPSNIGR 645
            ADD  K +LKIIGDH+RAIVYLISDGV+PSNIGR
Sbjct: 356 LADDRTKMNLKIIGDHLRAIVYLISDGVLPSNIGR 390


>sp|B9FSH5.1|SYAP_ORYSJ RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
           AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
           gi|222635304|gb|EEE65436.1| hypothetical protein
           OsJ_20798 [Oryza sativa Japonica Group]
          Length = 932

 Score =  397 bits (1019), Expect = e-108
 Identities = 185/215 (86%), Positives = 200/215 (93%)
 Frame = +1

Query: 1   RHHTFFEMLGNFSFGDYFKREAIKWAWELSTKEFALPSERLWISVFEDDDEAFSIWRDEV 180
           RH TFFEMLGNFSFGDYFK+EAI WAWEL+TKEF LP ERLWISVF+DDDEAFSIW +EV
Sbjct: 113 RHQTFFEMLGNFSFGDYFKKEAITWAWELTTKEFGLPPERLWISVFQDDDEAFSIWHNEV 172

Query: 181 GVPVERIKRMGEDDNFWTSGVTGPCGPCSEIYYDFHPERGNSDADLDDDSRFIEFYNLVF 360
           GVP ERIKR+GEDDNFWTSG TGPCGPCSEIYYDF+PERG+SDADL DDSRFIEFYNLVF
Sbjct: 173 GVPKERIKRLGEDDNFWTSGATGPCGPCSEIYYDFYPERGSSDADLGDDSRFIEFYNLVF 232

Query: 361 MQYNKMDDGSLEPLKQKNIDTGLGLERMARILQKVPTNYETDLIYPIIEKVADLAMVSYA 540
           MQYNK DDGSLEPLKQKNIDTG+GLERMARILQKVP NYETDLI+PIIEK A +A+VSY 
Sbjct: 233 MQYNKKDDGSLEPLKQKNIDTGMGLERMARILQKVPNNYETDLIFPIIEKAASMALVSYT 292

Query: 541 QADDHIKTSLKIIGDHMRAIVYLISDGVVPSNIGR 645
            ADD +KT+LKIIGDHMRA+VYLISDGV+PSNIGR
Sbjct: 293 TADDAMKTNLKIIGDHMRAVVYLISDGVIPSNIGR 327


>sp|B8B4H5.1|SYAP_ORYSI RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
           AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
           Flags: Precursor gi|218197887|gb|EEC80314.1|
           hypothetical protein OsI_22356 [Oryza sativa Indica
           Group]
          Length = 996

 Score =  397 bits (1019), Expect = e-108
 Identities = 185/215 (86%), Positives = 200/215 (93%)
 Frame = +1

Query: 1   RHHTFFEMLGNFSFGDYFKREAIKWAWELSTKEFALPSERLWISVFEDDDEAFSIWRDEV 180
           RH TFFEMLGNFSFGDYFK+EAI WAWEL+TKEF LP ERLWISVF+DDDEAFSIW +EV
Sbjct: 177 RHQTFFEMLGNFSFGDYFKKEAITWAWELTTKEFGLPPERLWISVFQDDDEAFSIWHNEV 236

Query: 181 GVPVERIKRMGEDDNFWTSGVTGPCGPCSEIYYDFHPERGNSDADLDDDSRFIEFYNLVF 360
           GVP ERIKR+GEDDNFWTSG TGPCGPCSEIYYDF+PERG+SDADL DDSRFIEFYNLVF
Sbjct: 237 GVPKERIKRLGEDDNFWTSGATGPCGPCSEIYYDFYPERGSSDADLGDDSRFIEFYNLVF 296

Query: 361 MQYNKMDDGSLEPLKQKNIDTGLGLERMARILQKVPTNYETDLIYPIIEKVADLAMVSYA 540
           MQYNK DDGSLEPLKQKNIDTG+GLERMARILQKVP NYETDLI+PIIEK A +A+VSY 
Sbjct: 297 MQYNKKDDGSLEPLKQKNIDTGMGLERMARILQKVPNNYETDLIFPIIEKAASMALVSYT 356

Query: 541 QADDHIKTSLKIIGDHMRAIVYLISDGVVPSNIGR 645
            ADD +KT+LKIIGDHMRA+VYLISDGV+PSNIGR
Sbjct: 357 TADDAMKTNLKIIGDHMRAVVYLISDGVIPSNIGR 391


>ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic [Vitis
           vinifera] gi|297744517|emb|CBI37779.3| unnamed protein
           product [Vitis vinifera]
          Length = 1006

 Score =  394 bits (1011), Expect = e-107
 Identities = 185/215 (86%), Positives = 198/215 (92%)
 Frame = +1

Query: 1   RHHTFFEMLGNFSFGDYFKREAIKWAWELSTKEFALPSERLWISVFEDDDEAFSIWRDEV 180
           RHHTFFEMLGNFSFGDYFK+EAIKWAWELST E+ LP++RLWISV+EDDDEA +IW  EV
Sbjct: 185 RHHTFFEMLGNFSFGDYFKKEAIKWAWELSTIEYGLPADRLWISVYEDDDEALAIWTKEV 244

Query: 181 GVPVERIKRMGEDDNFWTSGVTGPCGPCSEIYYDFHPERGNSDADLDDDSRFIEFYNLVF 360
           GVPVERIKRMG +DNFWTSGVTGPCGPCSEIYYDFHPERG SD DL DD+RFIEFYNLVF
Sbjct: 245 GVPVERIKRMGAEDNFWTSGVTGPCGPCSEIYYDFHPERGYSDVDLGDDTRFIEFYNLVF 304

Query: 361 MQYNKMDDGSLEPLKQKNIDTGLGLERMARILQKVPTNYETDLIYPIIEKVADLAMVSYA 540
           MQYNK DDGSLEPLKQ NIDTGLGLERMARILQKVP NYETDLIYPIIEK ++LA VSYA
Sbjct: 305 MQYNKKDDGSLEPLKQMNIDTGLGLERMARILQKVPNNYETDLIYPIIEKASELANVSYA 364

Query: 541 QADDHIKTSLKIIGDHMRAIVYLISDGVVPSNIGR 645
            ADDH K +LK+IGDH+RAIVYLISDGVVPSNIGR
Sbjct: 365 LADDHAKMNLKVIGDHLRAIVYLISDGVVPSNIGR 399


>dbj|BAJ94736.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 981

 Score =  390 bits (1003), Expect = e-107
 Identities = 179/215 (83%), Positives = 201/215 (93%)
 Frame = +1

Query: 1   RHHTFFEMLGNFSFGDYFKREAIKWAWELSTKEFALPSERLWISVFEDDDEAFSIWRDEV 180
           RH TFFEMLGNFSFGDYFK++AIKWAWEL+TKE+ LP ERLWISVFEDDDE FSIW +EV
Sbjct: 161 RHQTFFEMLGNFSFGDYFKKDAIKWAWELTTKEYGLPPERLWISVFEDDDETFSIWLNEV 220

Query: 181 GVPVERIKRMGEDDNFWTSGVTGPCGPCSEIYYDFHPERGNSDADLDDDSRFIEFYNLVF 360
           GVP ERIKRMGEDDNFWTSG TGPCGPCSE+YYDFHPERG+ +ADL+DDSRFIEFYNLVF
Sbjct: 221 GVPKERIKRMGEDDNFWTSGATGPCGPCSEMYYDFHPERGSLNADLNDDSRFIEFYNLVF 280

Query: 361 MQYNKMDDGSLEPLKQKNIDTGLGLERMARILQKVPTNYETDLIYPIIEKVADLAMVSYA 540
           MQYNK DDGSLEPLKQKNIDTG+GLERMARILQ VP NYETDLI+PI+EK A +A+VSY+
Sbjct: 281 MQYNKNDDGSLEPLKQKNIDTGMGLERMARILQNVPNNYETDLIFPIMEKAASMALVSYS 340

Query: 541 QADDHIKTSLKIIGDHMRAIVYLISDGVVPSNIGR 645
           +ADD ++T+LK+IGDHMRA+VYLISDGV+PSNIGR
Sbjct: 341 KADDAMRTNLKVIGDHMRAVVYLISDGVIPSNIGR 375


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