BLASTX nr result

ID: Coptis23_contig00027068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027068
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523266.1| conserved hypothetical protein [Ricinus comm...   107   2e-21
ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267...   101   9e-20
gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]       99   6e-19
ref|XP_002885068.1| hypothetical protein ARALYDRAFT_478942 [Arab...    92   4e-17
ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221...    92   5e-17

>ref|XP_002523266.1| conserved hypothetical protein [Ricinus communis]
           gi|223537479|gb|EEF39105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  107 bits (266), Expect = 2e-21
 Identities = 67/150 (44%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
 Frame = -3

Query: 447 KPNTLLSFPPQLQTKPCLFLAQLTEQPXXXXXTPFEDGPVELP-PSPTSIFATTDDPTPL 271
           KP +L +F     +KP ++LA           +P EDGP+ELP PS  SIFATTDDP+P+
Sbjct: 35  KPTSLSTFSALPPSKPDIWLASEPTPVTPPSPSPEEDGPIELPFPSSPSIFATTDDPSPI 94

Query: 270 QVATSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXX 91
           QVATSVLLTG+I V             KELK+RS G KK++KEEALD+LK M  A+ D  
Sbjct: 95  QVATSVLLTGSIGVFLFRALRRRAKRAKELKFRSSGAKKTMKEEALDSLKAMGSASIDAQ 154

Query: 90  XXXXXXXXXXXXXXXXXXXXXLYKFATTVE 1
                                LYKF TT+E
Sbjct: 155 KPPSPLQTFLGGVSAAVIALILYKFTTTIE 184


>ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267434 [Vitis vinifera]
           gi|302142945|emb|CBI20240.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  101 bits (251), Expect = 9e-20
 Identities = 60/111 (54%), Positives = 73/111 (65%)
 Frame = -3

Query: 447 KPNTLLSFPPQLQTKPCLFLAQLTEQPXXXXXTPFEDGPVELPPSPTSIFATTDDPTPLQ 268
           +P +L      L+T+    LAQ+   P      P E+GP+ELPPS +SIFAT DDPTPLQ
Sbjct: 33  RPTSLHLVSAHLRTRAEPLLAQV---PDTTTTAP-EEGPIELPPSSSSIFATNDDPTPLQ 88

Query: 267 VATSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGM 115
           VATSVLLTGAISV             KEL++RS GVKK++KEEALD+LK M
Sbjct: 89  VATSVLLTGAISVFLFRSIRRRVKRAKELRFRSSGVKKTLKEEALDSLKAM 139


>gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 238

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 65/144 (45%), Positives = 79/144 (54%)
 Frame = -3

Query: 432 LSFPPQLQTKPCLFLAQLTEQPXXXXXTPFEDGPVELPPSPTSIFATTDDPTPLQVATSV 253
           LS  P+ +  P L+LAQL EQ       P E+GP+E+  S  SIFAT+DDP+ +QVATSV
Sbjct: 45  LSALPRSRPDPPLWLAQLPEQAPE----PEEEGPIEILRSSPSIFATSDDPSSIQVATSV 100

Query: 252 LLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXXXXXXXX 73
           LLTGAISV             KELK+RS G KK++KEEALD+LK    A  D        
Sbjct: 101 LLTGAISVFLFRSLRRRAKRSKELKFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPPSPV 160

Query: 72  XXXXXXXXXXXXXXXLYKFATTVE 1
                          LYKF TT+E
Sbjct: 161 QAFLGAISAGVIALILYKFTTTIE 184


>ref|XP_002885068.1| hypothetical protein ARALYDRAFT_478942 [Arabidopsis lyrata subsp.
           lyrata] gi|297330908|gb|EFH61327.1| hypothetical protein
           ARALYDRAFT_478942 [Arabidopsis lyrata subsp. lyrata]
          Length = 261

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 7/83 (8%)
 Frame = -3

Query: 342 EDGPVELPPSPTS-------IFATTDDPTPLQVATSVLLTGAISVXXXXXXXXXXXXXKE 184
           EDGP+ELPPS TS       IFAT+DDPTPLQ+ATSVLLTGAI+V             KE
Sbjct: 56  EDGPIELPPSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAKRAKE 115

Query: 183 LKYRSDGVKKSIKEEALDNLKGM 115
           L++RS G KKS+KEEA+DNLK +
Sbjct: 116 LRFRSTGAKKSLKEEAMDNLKAL 138


>ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]
           gi|449495512|ref|XP_004159863.1| PREDICTED:
           uncharacterized LOC101221005 [Cucumis sativus]
          Length = 282

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 64/149 (42%), Positives = 77/149 (51%)
 Frame = -3

Query: 447 KPNTLLSFPPQLQTKPCLFLAQLTEQPXXXXXTPFEDGPVELPPSPTSIFATTDDPTPLQ 268
           +P T  S  P L    C  L Q T+          ++GPVELPP+   IFATTDDP+ LQ
Sbjct: 39  RPITFHSVSP-LTNHRCFCLPQFTDLADATFLD--DNGPVELPPT---IFATTDDPSSLQ 92

Query: 267 VATSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGMKLATEDXXX 88
           VATSVLLTGAISV             KELK+RS GVKKS+KEEA+D+LK +     +   
Sbjct: 93  VATSVLLTGAISVFLFRSLRRRAKRVKELKFRSGGVKKSLKEEAMDSLKAISTGPIESKS 152

Query: 87  XXXXXXXXXXXXXXXXXXXXLYKFATTVE 1
                               LYKF TT+E
Sbjct: 153 TPSPIQAFLGAIAAGVIALILYKFTTTIE 181


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