BLASTX nr result

ID: Coptis23_contig00027064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027064
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17460.3| unnamed protein product [Vitis vinifera]              322   6e-86
ref|XP_002268940.1| PREDICTED: disease resistance RPP13-like pro...   322   6e-86
ref|XP_002327785.1| cc-nbs-lrr resistance protein [Populus trich...   321   1e-85
emb|CAN63363.1| hypothetical protein VITISV_002407 [Vitis vinifera]   319   4e-85
ref|XP_002521529.1| Disease resistance protein RGA2, putative [R...   308   1e-81

>emb|CBI17460.3| unnamed protein product [Vitis vinifera]
          Length = 1021

 Score =  322 bits (825), Expect = 6e-86
 Identities = 161/268 (60%), Positives = 196/268 (73%)
 Frame = -1

Query: 804  EEDTFCTSNGIKSRHLSLKSDMDRRCFQTNLNLRVLLSTTKTGETNKVASSVAARFCGCR 625
            E+D F        RHL ++ D+DR+    N  LR LLST KTGE NKVASS A +FC CR
Sbjct: 441  EDDAFSGPTTASCRHLGIEGDIDRKYDMPNQKLRALLSTIKTGEVNKVASSNAKKFCDCR 500

Query: 624  YLRVLDLSKSIFETHLTSLLDNIGFLQHLTYLSLSNTHPLVQVPHSLDKLSNLKILDLSY 445
            YLRVLD+SK+IF+  LT LLD+IGFLQHLTYLSLSNTHPL +VP +L++L NL++LDLSY
Sbjct: 501  YLRVLDISKTIFDKSLTGLLDHIGFLQHLTYLSLSNTHPLTEVPPALEELRNLQVLDLSY 560

Query: 444  CQNLKVLPSYVTNLHNLIVLDVSYCGSLEYLPKGLGRLSNLQALLGFRPARPNQSKGCRI 265
            CQNLK+LPSYVT    L VLDVS+CGSL YLPKGLG LSNLQ LLGF+PA+ NQ +GCRI
Sbjct: 561  CQNLKMLPSYVTTFEKLTVLDVSHCGSLRYLPKGLGSLSNLQILLGFKPAKSNQLEGCRI 620

Query: 264  AXXXXXXXXXXXXXXXXXXXEIGDDEVDILSSLQQLQFLTITCFDTHGSGLMEMMDKLSP 85
            A                   EIGD++ ++L  L+ LQFL I+CFD+HG  L+  +DKLSP
Sbjct: 621  AELRSLTKLRRLGLQLTQGDEIGDNDDNVLVGLRGLQFLVISCFDSHGDDLIPKLDKLSP 680

Query: 84   PQQLLELCLKFFPGDMSPIWINPVSLPM 1
            PQQL EL L+F+PG M+P W+NP SLP+
Sbjct: 681  PQQLHELSLRFYPGKMNPGWLNPFSLPI 708


>ref|XP_002268940.1| PREDICTED: disease resistance RPP13-like protein 4 [Vitis vinifera]
          Length = 850

 Score =  322 bits (825), Expect = 6e-86
 Identities = 161/268 (60%), Positives = 196/268 (73%)
 Frame = -1

Query: 804  EEDTFCTSNGIKSRHLSLKSDMDRRCFQTNLNLRVLLSTTKTGETNKVASSVAARFCGCR 625
            E+D F        RHL ++ D+DR+    N  LR LLST KTGE NKVASS A +FC CR
Sbjct: 497  EDDAFSGPTTASCRHLGIEGDIDRKYDMPNQKLRALLSTIKTGEVNKVASSNAKKFCDCR 556

Query: 624  YLRVLDLSKSIFETHLTSLLDNIGFLQHLTYLSLSNTHPLVQVPHSLDKLSNLKILDLSY 445
            YLRVLD+SK+IF+  LT LLD+IGFLQHLTYLSLSNTHPL +VP +L++L NL++LDLSY
Sbjct: 557  YLRVLDISKTIFDKSLTGLLDHIGFLQHLTYLSLSNTHPLTEVPPALEELRNLQVLDLSY 616

Query: 444  CQNLKVLPSYVTNLHNLIVLDVSYCGSLEYLPKGLGRLSNLQALLGFRPARPNQSKGCRI 265
            CQNLK+LPSYVT    L VLDVS+CGSL YLPKGLG LSNLQ LLGF+PA+ NQ +GCRI
Sbjct: 617  CQNLKMLPSYVTTFEKLTVLDVSHCGSLRYLPKGLGSLSNLQILLGFKPAKSNQLEGCRI 676

Query: 264  AXXXXXXXXXXXXXXXXXXXEIGDDEVDILSSLQQLQFLTITCFDTHGSGLMEMMDKLSP 85
            A                   EIGD++ ++L  L+ LQFL I+CFD+HG  L+  +DKLSP
Sbjct: 677  AELRSLTKLRRLGLQLTQGDEIGDNDDNVLVGLRGLQFLVISCFDSHGDDLIPKLDKLSP 736

Query: 84   PQQLLELCLKFFPGDMSPIWINPVSLPM 1
            PQQL EL L+F+PG M+P W+NP SLP+
Sbjct: 737  PQQLHELSLRFYPGKMNPGWLNPFSLPI 764


>ref|XP_002327785.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222836870|gb|EEE75263.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 849

 Score =  321 bits (822), Expect = 1e-85
 Identities = 163/268 (60%), Positives = 195/268 (72%)
 Frame = -1

Query: 804  EEDTFCTSNGIKSRHLSLKSDMDRRCFQTNLNLRVLLSTTKTGETNKVASSVAARFCGCR 625
            E + F    G   RH  + + MD +    N  LR LLSTTKTGE NK++SS+A +F  C+
Sbjct: 496  ENEAFFKVTGRGCRHFGIDTKMDPKQLAANHKLRALLSTTKTGEVNKISSSIANKFSECK 555

Query: 624  YLRVLDLSKSIFETHLTSLLDNIGFLQHLTYLSLSNTHPLVQVPHSLDKLSNLKILDLSY 445
            YLRVLDL KSIFE  LTSLL +IGFLQHLTYLSLSNTHPL+Q+P SL+ L NL+IL++SY
Sbjct: 556  YLRVLDLCKSIFEMSLTSLLSHIGFLQHLTYLSLSNTHPLIQLPPSLENLKNLEILNVSY 615

Query: 444  CQNLKVLPSYVTNLHNLIVLDVSYCGSLEYLPKGLGRLSNLQALLGFRPARPNQSKGCRI 265
             QNLKVLP Y+T    L VLDVS+CGSLEYLPKGLGRLSNL+ LLGFRPAR +Q  GCRI
Sbjct: 616  SQNLKVLPPYLTKFKKLRVLDVSHCGSLEYLPKGLGRLSNLEVLLGFRPARASQLDGCRI 675

Query: 264  AXXXXXXXXXXXXXXXXXXXEIGDDEVDILSSLQQLQFLTITCFDTHGSGLMEMMDKLSP 85
            A                   EIGD EV  L +LQQLQFLTI+CFD+HGSGL++ +DKL P
Sbjct: 676  AELRKLSRLRKLGLHLVWVDEIGDSEVSALVNLQQLQFLTISCFDSHGSGLVDKLDKLYP 735

Query: 84   PQQLLELCLKFFPGDMSPIWINPVSLPM 1
            P +L ELCL+F+PG +SP W+NP+SL M
Sbjct: 736  PPELHELCLQFYPGKLSPAWLNPISLHM 763


>emb|CAN63363.1| hypothetical protein VITISV_002407 [Vitis vinifera]
          Length = 850

 Score =  319 bits (818), Expect = 4e-85
 Identities = 160/268 (59%), Positives = 194/268 (72%)
 Frame = -1

Query: 804  EEDTFCTSNGIKSRHLSLKSDMDRRCFQTNLNLRVLLSTTKTGETNKVASSVAARFCGCR 625
            E+D F        RHL ++ D+DR+    N  LR LLST KTGE NKVASS A +FC CR
Sbjct: 497  EDDAFSGPTTASCRHLGIEGDIDRKYDMPNQKLRALLSTIKTGEVNKVASSNAKKFCDCR 556

Query: 624  YLRVLDLSKSIFETHLTSLLDNIGFLQHLTYLSLSNTHPLVQVPHSLDKLSNLKILDLSY 445
            YLRVLD SK+IF+  LT LLD+IGFLQHLTYLSLSNTHPL +VP +L+ L NL++LDLSY
Sbjct: 557  YLRVLDXSKTIFDKSLTGLLDHIGFLQHLTYLSLSNTHPLTEVPPALEXLRNLQVLDLSY 616

Query: 444  CQNLKVLPSYVTNLHNLIVLDVSYCGSLEYLPKGLGRLSNLQALLGFRPARPNQSKGCRI 265
            CQNLK+LPSYVT    L VLDVS+CGSL YLPKGLG LSNLQ LLGF+P++ NQ +GCRI
Sbjct: 617  CQNLKMLPSYVTTFEKLTVLDVSHCGSLRYLPKGLGSLSNLQVLLGFKPSKSNQLEGCRI 676

Query: 264  AXXXXXXXXXXXXXXXXXXXEIGDDEVDILSSLQQLQFLTITCFDTHGSGLMEMMDKLSP 85
            A                   EIGD++ ++L  L+ LQFL I+CFD+HG  L+  +DKLSP
Sbjct: 677  AELRSLTKLRRLGLQLTQGDEIGDNDDNVLVGLRGLQFLVISCFDSHGDDLIPKLDKLSP 736

Query: 84   PQQLLELCLKFFPGDMSPIWINPVSLPM 1
            PQQL EL L+F+PG M+P W+NP SLP+
Sbjct: 737  PQQLHELSLRFYPGKMNPGWLNPFSLPI 764


>ref|XP_002521529.1| Disease resistance protein RGA2, putative [Ricinus communis]
            gi|223539207|gb|EEF40800.1| Disease resistance protein
            RGA2, putative [Ricinus communis]
          Length = 848

 Score =  308 bits (788), Expect = 1e-81
 Identities = 154/267 (57%), Positives = 195/267 (73%)
 Frame = -1

Query: 801  EDTFCTSNGIKSRHLSLKSDMDRRCFQTNLNLRVLLSTTKTGETNKVASSVAARFCGCRY 622
            +D F   NGI  RHL++ S+MD++    N  LR LLSTTKTGE N++ SS+A +F  C+Y
Sbjct: 496  DDAFFKLNGIGCRHLAICSNMDQKKLTANQKLRALLSTTKTGEVNRIVSSIANKFSECKY 555

Query: 621  LRVLDLSKSIFETHLTSLLDNIGFLQHLTYLSLSNTHPLVQVPHSLDKLSNLKILDLSYC 442
            LRVLDL KSIFE  LT+LL  IG LQHLTYLSLSNTHPL+++P SL+KL NL+ILD+SYC
Sbjct: 556  LRVLDLCKSIFEVPLTNLLYQIGDLQHLTYLSLSNTHPLIELPPSLEKLKNLQILDMSYC 615

Query: 441  QNLKVLPSYVTNLHNLIVLDVSYCGSLEYLPKGLGRLSNLQALLGFRPARPNQSKGCRIA 262
            QNLK+LP Y+     L VLDVS+CGSLEYLPKGLGRLSNL+ L+GFRP+R  Q  GCRIA
Sbjct: 616  QNLKMLPPYLITFKKLRVLDVSHCGSLEYLPKGLGRLSNLEVLMGFRPSRLGQLGGCRIA 675

Query: 261  XXXXXXXXXXXXXXXXXXXEIGDDEVDILSSLQQLQFLTITCFDTHGSGLMEMMDKLSPP 82
                               EI D+EV+ L +LQ+L+ LTI+CFD+ G+ L+  +D+L PP
Sbjct: 676  ELRNLTRLRTLSLHLTQGDEIEDNEVNALVNLQELEHLTISCFDSQGNDLIGKLDRLYPP 735

Query: 81   QQLLELCLKFFPGDMSPIWINPVSLPM 1
             ++ EL L F+PG MSP+W+NP+SLPM
Sbjct: 736  PEIYELSLAFYPGKMSPVWLNPISLPM 762


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