BLASTX nr result
ID: Coptis23_contig00027043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00027043
(507 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
ref|XP_002327079.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11
emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera] 74 2e-11
gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays] 72 4e-11
gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays] 72 4e-11
>ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 73.6 bits (179), Expect = 2e-11
Identities = 34/112 (30%), Positives = 68/112 (60%)
Frame = +1
Query: 1 QAYKLKDLIATKEFISDIDNYNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVL 180
+A++L+D + + + +I YNAL+ G+C + +D A++L + KGL P++ +N ++
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826
Query: 181 RGYCMLKNVTAALGMLEKIKEKGMVPELGPCNNLISILMNEEKVEEAMQVKN 336
GYC + N+ AA + +K+ E+G+ P + + LI+ L +E +M++ N
Sbjct: 827 DGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN 878
Score = 59.3 bits (142), Expect = 3e-07
Identities = 32/111 (28%), Positives = 57/111 (51%)
Frame = +1
Query: 4 AYKLKDLIATKEFISDIDNYNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVLR 183
A + +++ K F+ D Y L+ G AG +D A +L E +GL P++ +NA++
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792
Query: 184 GYCMLKNVTAALGMLEKIKEKGMVPELGPCNNLISILMNEEKVEEAMQVKN 336
G C +NV A + K+ +KG+ P + N LI ++ A ++K+
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843
>ref|XP_002327079.1| predicted protein [Populus trichocarpa] gi|222835394|gb|EEE73829.1|
predicted protein [Populus trichocarpa]
Length = 795
Score = 73.6 bits (179), Expect = 2e-11
Identities = 36/112 (32%), Positives = 66/112 (58%)
Frame = +1
Query: 1 QAYKLKDLIATKEFISDIDNYNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVL 180
+A+ L+D + K + +I YNAL+ G+C +G +D A +L + KGL P++ +N ++
Sbjct: 610 EAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILI 669
Query: 181 RGYCMLKNVTAALGMLEKIKEKGMVPELGPCNNLISILMNEEKVEEAMQVKN 336
GYC + AL + K+ ++G+ P + ++LI+ + VEEAM++ N
Sbjct: 670 DGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLN 721
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/107 (25%), Positives = 57/107 (53%)
Frame = +1
Query: 1 QAYKLKDLIATKEFISDIDNYNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVL 180
+A+K+K+ + +E I+ YN+L+ G+ + ++ LL E +GL P++ + A++
Sbjct: 400 EAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALI 459
Query: 181 RGYCMLKNVTAALGMLEKIKEKGMVPELGPCNNLISILMNEEKVEEA 321
G+C + A ++ KG P + C+ ++S L +++EA
Sbjct: 460 AGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA 506
>emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 73.6 bits (179), Expect = 2e-11
Identities = 34/112 (30%), Positives = 68/112 (60%)
Frame = +1
Query: 1 QAYKLKDLIATKEFISDIDNYNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVL 180
+A++L+D + + + +I YNAL+ G+C + +D A++L + KGL P++ +N ++
Sbjct: 767 EAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826
Query: 181 RGYCMLKNVTAALGMLEKIKEKGMVPELGPCNNLISILMNEEKVEEAMQVKN 336
GYC + N+ AA + +K+ E+G+ P + + LI+ L +E +M++ N
Sbjct: 827 DGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN 878
Score = 59.3 bits (142), Expect = 3e-07
Identities = 32/111 (28%), Positives = 57/111 (51%)
Frame = +1
Query: 4 AYKLKDLIATKEFISDIDNYNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVLR 183
A + +++ K F+ D Y L+ G AG +D A +L E +GL P++ +NA++
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALIN 792
Query: 184 GYCMLKNVTAALGMLEKIKEKGMVPELGPCNNLISILMNEEKVEEAMQVKN 336
G C +NV A + K+ +KG+ P + N LI ++ A ++K+
Sbjct: 793 GLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843
>gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 72.4 bits (176), Expect = 4e-11
Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = +1
Query: 61 YNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVLRGYCMLKNVTAALGMLEKIK 240
YNAL+ G C+ GRMD A +LL E + KGL PD+ ++ ++ YC + +A + +++
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462
Query: 241 EKGMVPELGPCNNLISILMNEEKVEEA-MQVKNCIQVYENTNSSTNTA*VD 390
EKG++P+ ++LI +L E+++ +A + KN I++ + T T+ +D
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 513
Score = 57.4 bits (137), Expect = 1e-06
Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +1
Query: 61 YNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVLRGYCMLKNVTAALGMLEKIK 240
+N+++ G+C AG+M+ A K+ E +GL PD +N ++ GYC AL + ++
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322
Query: 241 EKGMVPELGPCNNLISILMNEEKVEEAMQ-VKNCIQVYENTNSSTNTA*VD 390
+KG++P++ +LI ++ +E A+ V+ + N T TA +D
Sbjct: 323 QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALID 373
>gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 72.4 bits (176), Expect = 4e-11
Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = +1
Query: 61 YNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVLRGYCMLKNVTAALGMLEKIK 240
YNAL+ G C+ GRMD A +LL E + KGL PD+ ++ ++ YC + +A + +++
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422
Query: 241 EKGMVPELGPCNNLISILMNEEKVEEA-MQVKNCIQVYENTNSSTNTA*VD 390
EKG++P+ ++LI +L E+++ +A + KN I++ + T T+ +D
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473
Score = 57.0 bits (136), Expect = 2e-06
Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +1
Query: 61 YNALMEGICLAGRMDMAEKLLQEFQHKGLDPDLRMWNAVLRGYCMLKNVTAALGMLEKIK 240
+N+++ G+C AG+M+ A K+ E +GL PD +N ++ GYC AL + ++
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 282
Query: 241 EKGMVPELGPCNNLISILMNEEKVEEAMQ-VKNCIQVYENTNSSTNTA*VD 390
+KG++P++ +LI ++ +E A+ V+ + N T TA +D
Sbjct: 283 QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALID 333