BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027037
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]            89   4e-16
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]      89   4e-16
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...    89   4e-16
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...    87   1e-15
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...    87   1e-15

>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/70 (64%), Positives = 51/70 (72%)
 Frame = -3

Query: 523  EGISISQRKYVENVLEKLKMSGCKAVATPLQVNEKLLKGDGAMKADASTYRSMIGSLLYL 344
            EGI ISQRKY EN+L+K KM  CK+V TPL  NEK    DGA KAD + YRS++GSLLYL
Sbjct: 1064 EGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYL 1123

Query: 343  MATGPGITFA 314
             AT P I FA
Sbjct: 1124 TATRPDIMFA 1133



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/53 (69%), Positives = 42/53 (79%)
 Frame = -2

Query: 161  QRVLRYLQGTLDYGISFKASKEAKLIGYTGSDWAGLSDDQKSTSRYVFFLGSA 3
            +RVLRY++GT DYGI +K  KE+KLIGYT SDWAG  DD KSTS Y F LGSA
Sbjct: 1153 KRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSA 1205


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/70 (64%), Positives = 51/70 (72%)
 Frame = -3

Query: 523  EGISISQRKYVENVLEKLKMSGCKAVATPLQVNEKLLKGDGAMKADASTYRSMIGSLLYL 344
            EGI ISQRKY EN+L+K KM  CK+V TPL  NEK    DGA KAD + YRS++GSLLYL
Sbjct: 869  EGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYL 928

Query: 343  MATGPGITFA 314
             AT P I FA
Sbjct: 929  TATRPDIMFA 938



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = -2

Query: 161  QRVLRYLQGTLDYGISFKASKEAKLIGYTGSDWAGLSDDQKSTSRYVFFLGS 6
            +RVLRY++GT  YGI +K  KE+KLIGYT SDWAG  DD KSTS Y F LGS
Sbjct: 958  KRVLRYIKGTAYYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGS 1009


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/70 (64%), Positives = 51/70 (72%)
 Frame = -3

Query: 523  EGISISQRKYVENVLEKLKMSGCKAVATPLQVNEKLLKGDGAMKADASTYRSMIGSLLYL 344
            EGI ISQRKY EN+L+K KM  CK+V TPL  NEK    DGA KAD + YRS++GSLLYL
Sbjct: 1085 EGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYL 1144

Query: 343  MATGPGITFA 314
             AT P I FA
Sbjct: 1145 TATRPDIMFA 1154



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/53 (69%), Positives = 42/53 (79%)
 Frame = -2

Query: 161  QRVLRYLQGTLDYGISFKASKEAKLIGYTGSDWAGLSDDQKSTSRYVFFLGSA 3
            +RVLRY++GT DYGI +K  KE+KLIGYT SDWAG  DD KSTS Y F LGSA
Sbjct: 1174 KRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSA 1226


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/70 (62%), Positives = 50/70 (71%)
 Frame = -3

Query: 523  EGISISQRKYVENVLEKLKMSGCKAVATPLQVNEKLLKGDGAMKADASTYRSMIGSLLYL 344
            EGI ISQRKY EN+L+K KM  CK+V TPL  NEK    DGA K D + YRS++GSLLYL
Sbjct: 875  EGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLYL 934

Query: 343  MATGPGITFA 314
             AT P I FA
Sbjct: 935  TATRPDIMFA 944



 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = -2

Query: 161  QRVLRYLQGTLDYGISFKASKEAKLIGYTGSDWAGLSDDQKSTSRYVFFLGS 6
            +RVLRY++GT DYGI +K  KE+KLIGYT SDWAG  DD K TS Y F LGS
Sbjct: 964  KRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGS 1015


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108708461|gb|ABF96256.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/70 (62%), Positives = 50/70 (71%)
 Frame = -3

Query: 523  EGISISQRKYVENVLEKLKMSGCKAVATPLQVNEKLLKGDGAMKADASTYRSMIGSLLYL 344
            EGI ISQRKY EN+L+K KM  CK+V TPL  NEK    DGA K D + YRS++GSLLYL
Sbjct: 917  EGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLYL 976

Query: 343  MATGPGITFA 314
             AT P I FA
Sbjct: 977  TATRPDIMFA 986



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/53 (69%), Positives = 42/53 (79%)
 Frame = -2

Query: 161  QRVLRYLQGTLDYGISFKASKEAKLIGYTGSDWAGLSDDQKSTSRYVFFLGSA 3
            +RVLRY++GT DYGI +K  KE+KLIGYT SDWAG  DD KSTS Y F LGSA
Sbjct: 1006 KRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSA 1058