BLASTX nr result
ID: Coptis23_contig00027033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00027033
(1259 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-13
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-13
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-12
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-12
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2... 61 3e-08
>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
predicted protein [Populus trichocarpa]
Length = 1046
Score = 74.3 bits (181), Expect(2) = 3e-13
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = -3
Query: 1188 DAKVNGLISNGEWNN-ILQGLTQGTLKDYILNTSINNYIENDSVYYAPEASGNFSSKSVY 1012
+AKVN LI N EW Q + + + I + S + D + + + FS K +
Sbjct: 804 NAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAW 863
Query: 1011 EALRIPKDKVI*FNLVWGKQVIPKHSFTIWQLFSGSLPTQDRLIQRKVXXXXXXXXXXXS 832
E LR + V ++VW K +P+HSF +W + L TQD+L + + +
Sbjct: 864 EQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 923
Query: 831 RENSKHVFFQCPYSSVIW 778
E+ H+FF+C Y+ IW
Sbjct: 924 NEDHNHLFFECSYTKAIW 941
Score = 27.7 bits (60), Expect(2) = 3e-13
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 677 KVFTCATVSYIWRERNFRRFQRTSQPSQVASGRI 576
K+ ATV ++W+ERN R F S+ S + +I
Sbjct: 979 KLSFAATVYHVWQERNARIFAGLSRTSNLVFNQI 1012
>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
predicted protein [Populus trichocarpa]
Length = 331
Score = 74.3 bits (181), Expect(2) = 3e-13
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = -3
Query: 1188 DAKVNGLISNGEWNN-ILQGLTQGTLKDYILNTSINNYIENDSVYYAPEASGNFSSKSVY 1012
+AKVN LI N EW Q + + + I + S + D + + + FS K +
Sbjct: 89 NAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAW 148
Query: 1011 EALRIPKDKVI*FNLVWGKQVIPKHSFTIWQLFSGSLPTQDRLIQRKVXXXXXXXXXXXS 832
E LR + V ++VW K +P+HSF +W + L TQD+L + + +
Sbjct: 149 EQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 208
Query: 831 RENSKHVFFQCPYSSVIW 778
E+ H+FF+C Y+ IW
Sbjct: 209 NEDHNHLFFECSYTKAIW 226
Score = 27.7 bits (60), Expect(2) = 3e-13
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 677 KVFTCATVSYIWRERNFRRFQRTSQPSQVASGRI 576
K+ ATV ++W+ERN R F S+ S + +I
Sbjct: 264 KLSFAATVYHVWQERNARIFAGLSRTSNLVFNQI 297
>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
predicted protein [Populus trichocarpa]
Length = 517
Score = 73.2 bits (178), Expect(2) = 3e-12
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = -3
Query: 1188 DAKVNGLISNGEWNN-ILQGLTQGTLKDYILNTSINNYIENDSVYYAPEASGNFSSKSVY 1012
+AKVN LI N EW Q + + + I + S + D + + + FS K +
Sbjct: 271 NAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAW 330
Query: 1011 EALRIPKDKVI*FNLVWGKQVIPKHSFTIWQLFSGSLPTQDRLIQRKVXXXXXXXXXXXS 832
E LR + V ++VW K +P+HSF +W L TQD+L + + +
Sbjct: 331 EQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRN 390
Query: 831 RENSKHVFFQCPYSSVIW 778
E+ H+FF+C Y+ IW
Sbjct: 391 NEDHNHLFFECSYTKAIW 408
Score = 25.8 bits (55), Expect(2) = 3e-12
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 677 KVFTCATVSYIWRERNFRRFQRTSQPSQVASGRI 576
K+ ATV ++W+ERN R F S+ + +I
Sbjct: 446 KLSFAATVYHVWQERNARIFAGMSRTPNLVLNQI 479
>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
predicted protein [Populus trichocarpa]
Length = 1386
Score = 72.0 bits (175), Expect(2) = 6e-12
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = -3
Query: 1188 DAKVNGLISNGEWNN-ILQGLTQGTLKDYILNTSINNYIENDSVYYAPEASGNFSSKSVY 1012
+AKVN LI N EW Q + + + I + S + D + + + F K +
Sbjct: 1144 NAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAW 1203
Query: 1011 EALRIPKDKVI*FNLVWGKQVIPKHSFTIWQLFSGSLPTQDRLIQRKVXXXXXXXXXXXS 832
E LR + V ++VW K +P+HSF +W L TQD+L + + +
Sbjct: 1204 EHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRN 1263
Query: 831 RENSKHVFFQCPYSSVIW 778
E+ H+FF+C Y+ IW
Sbjct: 1264 NEDHNHLFFECSYTKAIW 1281
Score = 25.8 bits (55), Expect(2) = 6e-12
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 677 KVFTCATVSYIWRERNFRRFQRTSQPSQVASGRI 576
K+ ATV ++W+ERN R F S+ + +I
Sbjct: 1319 KLSFAATVYHVWQERNARIFAGMSRTPNLVLNQI 1352
>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
predicted protein [Populus trichocarpa]
Length = 949
Score = 61.2 bits (147), Expect(2) = 3e-08
Identities = 31/94 (32%), Positives = 46/94 (48%)
Frame = -3
Query: 1044 ASGNFSSKSVYEALRIPKDKVI*FNLVWGKQVIPKHSFTIWQLFSGSLPTQDRLIQRKVX 865
+SGNFS S +E LR + ++L+W K IP+ +F +W L T DRL +
Sbjct: 760 SSGNFSIDSAWELLRDSRPLDSLYHLIWFKGHIPRQAFILWIASMDRLHTMDRLTSFGII 819
Query: 864 XXXXXXXXXXSRENSKHVFFQCPYSSVIWSIVKS 763
E H+FFQC YSS++W + +
Sbjct: 820 PSSTCVLCGMHNETHDHLFFQCTYSSILWGNISA 853
Score = 24.3 bits (51), Expect(2) = 3e-08
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 704 KNNVEAE--IVKVFTCATVSYIWRERNFRRFQRTSQPSQ 594
+NN E I ++ +V +IW ERN R F + + +Q
Sbjct: 876 RNNKEFSHIIARLVLSTSVYFIWFERNNRIFNKVFKTAQ 914