BLASTX nr result

ID: Coptis23_contig00027024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00027024
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551295.1| PREDICTED: L-type lectin-domain containing r...   169   2e-40
ref|XP_003530584.1| PREDICTED: L-type lectin-domain containing r...   169   2e-40
ref|XP_002527242.1| kinase, putative [Ricinus communis] gi|22353...   167   8e-40
ref|XP_002310341.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
emb|CAN80079.1| hypothetical protein VITISV_041810 [Vitis vinifera]   166   1e-39

>ref|XP_003551295.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IX.1-like [Glycine max]
          Length = 679

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/111 (71%), Positives = 94/111 (84%)
 Frame = -3

Query: 335 LHEEREQCVVHGDIKSSNVMLDSDFNAKLGDFGMARLMEHNLSLPTTQFAGTIGYIAPEC 156
           LHEE EQCVVH DIKSSNVMLD++FNAKLGDFG+ARL++H L   TT  AGT+GY+APEC
Sbjct: 463 LHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPEC 522

Query: 155 FSTGKTSKETDVYSYGVVALEIACGRKPTDTIEDGSPLRLVGWVWTLYGMG 3
            +TGK+SKE+DVYS+GVVALEI CGRKP +  E+ S +RLV WVW+LYG G
Sbjct: 523 VTTGKSSKESDVYSFGVVALEITCGRKPVEVREEPSKVRLVEWVWSLYGKG 573


>ref|XP_003530584.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IX.1-like [Glycine max]
          Length = 700

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/111 (71%), Positives = 94/111 (84%)
 Frame = -3

Query: 335 LHEEREQCVVHGDIKSSNVMLDSDFNAKLGDFGMARLMEHNLSLPTTQFAGTIGYIAPEC 156
           LHEE EQCVVH DIKSSNVMLD++FNAKLGDFG+ARL++H L   TT  AGT+GY+APEC
Sbjct: 486 LHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPEC 545

Query: 155 FSTGKTSKETDVYSYGVVALEIACGRKPTDTIEDGSPLRLVGWVWTLYGMG 3
            +TGK+SKE+DVYS+GVVALEI CGRKP +  E+ S +RLV WVW+LYG G
Sbjct: 546 VTTGKSSKESDVYSFGVVALEITCGRKPVEVREEPSKVRLVEWVWSLYGKG 596


>ref|XP_002527242.1| kinase, putative [Ricinus communis] gi|223533418|gb|EEF35168.1|
           kinase, putative [Ricinus communis]
          Length = 637

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/111 (70%), Positives = 91/111 (81%)
 Frame = -3

Query: 335 LHEEREQCVVHGDIKSSNVMLDSDFNAKLGDFGMARLMEHNLSLPTTQFAGTIGYIAPEC 156
           LHEE EQCVVH DIKSSNVMLDS+FNAKLGDFG+ARL++H L   TT  AGT+GY+APEC
Sbjct: 415 LHEEWEQCVVHRDIKSSNVMLDSNFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPEC 474

Query: 155 FSTGKTSKETDVYSYGVVALEIACGRKPTDTIEDGSPLRLVGWVWTLYGMG 3
            +TGK SKE+DVYS+GVVALEI CGR+P D  ++   +RLV WVW LYG G
Sbjct: 475 VTTGKASKESDVYSFGVVALEITCGRRPVDVRQEPDKVRLVEWVWDLYGKG 525


>ref|XP_002310341.1| predicted protein [Populus trichocarpa] gi|222853244|gb|EEE90791.1|
           predicted protein [Populus trichocarpa]
          Length = 692

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/111 (70%), Positives = 92/111 (82%)
 Frame = -3

Query: 335 LHEEREQCVVHGDIKSSNVMLDSDFNAKLGDFGMARLMEHNLSLPTTQFAGTIGYIAPEC 156
           LHEE EQCVVH DIKSSNVMLDS+FNAKLGDFG+ARL++H L   TT  AGT+GY+APEC
Sbjct: 461 LHEEWEQCVVHRDIKSSNVMLDSNFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPEC 520

Query: 155 FSTGKTSKETDVYSYGVVALEIACGRKPTDTIEDGSPLRLVGWVWTLYGMG 3
            +TGK SKE+DVYS+GVVALEI CGR+P +T ++   +RLV WVW LYG G
Sbjct: 521 VTTGKASKESDVYSFGVVALEITCGRRPVETRQEPCKVRLVEWVWNLYGEG 571


>emb|CAN80079.1| hypothetical protein VITISV_041810 [Vitis vinifera]
          Length = 684

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/111 (69%), Positives = 92/111 (82%)
 Frame = -3

Query: 335 LHEEREQCVVHGDIKSSNVMLDSDFNAKLGDFGMARLMEHNLSLPTTQFAGTIGYIAPEC 156
           LHEE EQCVVH DIKSSNVMLDSDFNAKLGDFG+ARL++H     TT  AGT+GY+APEC
Sbjct: 461 LHEEWEQCVVHRDIKSSNVMLDSDFNAKLGDFGLARLVDHGKGSQTTVLAGTMGYMAPEC 520

Query: 155 FSTGKTSKETDVYSYGVVALEIACGRKPTDTIEDGSPLRLVGWVWTLYGMG 3
           F+TGK SKE+DVYS+G+VALEI CGR+  +T  + + +RLV WVW LYG+G
Sbjct: 521 FTTGKASKESDVYSFGIVALEICCGRRAVETKAEENQIRLVEWVWDLYGVG 571


Top